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Chapter 5 - Metabolism and Enzymes
Dr. Bob Harms Intro to Bio Dr. Bob Harms
62
Biology
Undergraduate 1
09/20/2010

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Term
What is cellular metabolism?
Definition
All the chemical reactions occuring in a cell
Term
Cellular metabolism deals mostly with what?
Definition
energy conversion
Term
What goes in and what comes out during chemical reactions?
Definition
Reactants go in, products come out
Term
When is equilibrium reached?
Definition
When there is no net change in reactants and products
Term
Why is it that in most chemical reactions 100% of reactants don't turn into products?
Definition
Because chemicals are constantly in motion, so products are being turned back into reactants... so it will never reach 100%
Term
What are the two main categories of chemical reactions?
Definition
Endergonic and Exergonic
Term
How do Endergonic reactions work?
Definition
Endergonic (requiring energy input), usually occurs to build larger chemicals, which store the energy as potential energy.
Term
How do exergonic reactions work?
Definition
Energy "exits" when large chemicals, like glucose, are broken down to release energy.
Term
What kind of chemical reactions causes energy to be released?
Definition
Exergonic reactions
Term
What kind of chemical reaction requires energy inuput?
Definition
endergonic reactions
Term
What is the most important chemical in your cells regarding energy?
Definition
ATP
Term
What does ATP stand for?
Definition
Adenosine Triphosphate
Term
Is ATP immediately accessable, or is it a long term storage chemical?
Definition
ATP is for immediate energy use, and cells cannot survive for more than 2-3 minutes without it.
Term
How much work within a cell is ATP responsible for?
Definition
Nearly all of it.
Term
What is responsible for chemical reactions coupling?
Definition
ATP
Term
Why is there so much energy in ATP?
Definition
It has phosphate bonds, which have a lot of energy. When broken, it releases this energy very quickly.
Term
Why do phosphate bonds have so much energy?
Definition
Because each phosphates has a negative charge, so they are repelling each other. Hodling them close together takes a lot of energy. When that bond is broken it releases that energy.
Term
What functions in a cell does ATP power?
Definition
Endergonic reactions, muscle contractions, and active transport, all rely on energy from ATP
Term
What is ADP?
Definition
Adenosine Diphosphate
Term
What happens when you use ATP energy?
Definition
You then have a lot of ADP and phosphates floating around, which are then recycled back into ATP
Term
"Products of one reaction are reactants for the next reaction" is describing what process?
Definition
reaction coupling
Term
energy released from exergonic reactions is used for energonic reactions is an example of what?
Definition
Reaction coupling
Term
What are enzymes?
Definition
Proteins that will speed up chemical reactions
Term
All chemical reactions in living organisms require what?
Definition
Enzymes
Term
Enzymes are a type of...
Definition
Protein
Term
Enzymes often have what suffix?
Definition
"-ase" Lactase, sucrase, etc
Term
How do enzymes speed up chemical reactions?
Definition
By lowering the activation energy
Term
What is activiation energy?
Definition
The amount of chemical reactions that the reactants have to absorb to get started.
Term
What kind of reactions require activation energy?
Definition
Both endergonic and exergonic reactions require activation energy.
Term
Why doesn't the glucose in your body randomly break down?
Definition
The activation energy - for those glucoses to start breaking down, they would have to absorb some energy.
Term
How do enzymes lower activation energy?
Definition
They can bind the two reactants and hold them close together, or put them in the right orientation (place). The proteins in the enzymes can also create micro-environments (acidic, hydrophilic, etc) that can foster reactions.
Term
What is the "lock and key" model?
Definition
The idea that enzymes (like all proteins) have a specific shape, and the most important part of the enzyme is called the "active site" or "lock". That's where the reactant (or "key")binds.
Term
What directly determines the shape of an enzyme?
Definition
The order of amino acids which compose it
Term
What is the active site?
Definition
The part of the enzyme that binds to the reactant
Term
What do you call a reactant when an enzyme is present to help it along?
Definition
A substrate
Term
What is a substrate?
Definition
The name of the reactant when an enzyme is present
Term
In what ways are enzymes selective?
Definition
Both the shape and the chemistry must mesh with the chemicals' or it won't affect reactions
Term
Are enzymes reactants or products?
Definition
Neither; they're bystanders and can be used repeatedly.
Term
Do enzymes effect the equilibrium point?
Definition
No, they just help the chemicals get there faster
Term
If two chemicals normally don't bind together, what will happen if we add enzymes?
Definition
Nothing; we can't magically make chemicals react. enzymes only speed the natural procss up
Term
How much do enzymes speed up chemical reactions?
Definition
Anywhere from 1,000x to 1,000,000x faster (one thousand to one million)
Term
How many reactions can a single type of enzyme speed up?
Definition
Just one, enzymes are selective
Term
Could missing only one enzyme pose health problems?
Definition
Yes. One example is ADA, which results in your immune system breaking down because you can't break down the proteins like normal.
Term
What happens when a cell doesn't need the reaction that the enzyme speeds up to occur at all?
Definition
The cells don't break down the enzyme; instead they use chemical inhibitors.
Term
What is an inhibitor?
Definition
Any chemical that interfere's with an enzyme's activity.
Term
How does an inhibitor work?
Definition
It binds to an enzyme, which temporarily prevents it from reacting.
Term
Is an inhibitor permanent?
Definition
No. Chemicals are always in motion, so eventually while bouncing around they will break apart.
Term
How does a cell keep an enzyme inhibited if the inhibitor is temporary?
Definition
The cell must continually create inhibitors to bind to the enzyme
Term
How does a competitive inhibitor work?
Definition
It physically binds onto the active site of the enzyme, which blocks the substrate from getting to the enzyme
Term
Can a competitive inhibitor be vastly different than the substrate it is blocking?
Definition
No; if the competitive inhibitor is physically binding to the enzyme, which has a very specific 3 dimensional active site (or "lock") it must be at least moderately chemically similar.
Term
How do non-competitive inhibitors work?
Definition
They bind anywhere else on the enzyme (other than the active site) which changes the shape, so the active site is still there but no longer the same shape.
Term
Can non-competitive inhibitors be vastly different than the substrate it is blocking?
Definition
Yes; the non competitive inhibitor attaches somewhere else other than the active site, so it doesn't necessarily have to be a similar shape.
Term
Do chemical reactions occur in isolated incidents?
Definition
No, most chemical reactions occur in chains
Term
Are most cellular products quickly produced?
Definition
No, often times it takes many small steps to get a needed product
Term
If we have chain A>B>C>D>E>F>G and now have enough G, how do cells often times inhibit the enzymes?
Definition
Instead of inhibiting the 6 > (which would all be different enzymes) G (or other product near end of chain) would act as a non-competitive inhibitor for the enzyme between A and B, effectively shutting down the other processes as well.
Term
What is feedback inhibition? How does it work?
Definition
Feedback inhibition is when a product down the chain acts as an inhibitor for an early enzyme. If there is too much of the end products, it starts to inhibit the process and it stops getting produced. If there is not enough of the end product, it no longer has excess to act as an inhibitor and the pathway opens up again.
Term
How do poisons relate to inhibitors?
Definition
Many poisons are enzyme inhibitors. For example, Penicilin inhibits bacteria's ability to make cell walls. Certain pesticides inhibit enzymes in the nervous system and paralyze and kill insects
Term
What are some factors that influence an enzyme's efficency?
Definition
The enzyme concentration, the substrate concentration, temperature, or pH.
Term
What happens when you denature an enzyme?
Definition
the enzyme's 3-d shape is broken down
Term
What effect does temperature have on enzyme reaction rates?
Definition
Increase in temperature leads to increase in reaction rate, until optimum temperature is reached. After that if you continue to raise the temperature the rate declines almost to 0 immediately.
Term
What is optimum temperature?
Definition
The temperature where the reaction is occuring as fast as it possibly can
Term
What can cause denaturing in an enzyme?
Definition
Temperature too high, or chemicals such as pH.
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