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Chapter 11
Biological Membranes & Transport
52
Biochemistry
Undergraduate 3
03/21/2016

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Term
liquid-ordered (Lo) state
Definition
a semisolid state formed by the lipids in a bilayer below normal physiological temperatures; all types of motion of individual lipid molecules are strongly constrained; the bilayer is paracrystalline
Term
flippases
Definition
catalyze translocation of the amino-phospholipids phosphatidylethanolamine & phosphatidylserine from the extracellular to the cytosolic leaflet of the plasma membrane to contribute to the asymmetric distribution of phospholipids (phosphatidylethanolamine & phosphatidylserine are primarily in the cytosolic leaflet & the sphingolipids & phosphatidylcholine are in the outer leaflet)
Term
floppases
Definition
move plasma membrane phospholipids from the cytosolic to the extracellular leaflet & are ATP-dependent (like flippases)
Term
scramblases
Definition
proteins that move any membrane phospholipid across the bilayer down its concentration gradient; activity is not dependent on ATP
Term
FRAP
Definition
the rate of fluorescence recovery after photobleaching; a measure of the rate of lateral diffusion of the lipids
Term
cholesterol-sphingolipids microdomains
Definition
found in the outer monolayer of the plasma membrane & are slightly thicker & more ordered than neighboring microdomains rich in phospholipids & are more difficult to dissolve with nonionic detergents; behave like liquid-ordered sphingolipid rafts adrift in an ocean of liquid-disordered phospholipids
Term
2 integral membrane proteins to which lipid rafts are remarkably enriched in order to be anchored to the membrane
Definition
1. two covalently attached long-chain saturated fatty acids attached through Cys residues
2. GPI-anchored proteins
Term
caveolin
Definition
an integral membrane protein with two globular domains connected by a hairpin-shaped hydrophobic domain which binds the protein to the cytoplasmic leaflet of the plasma membrane
Term
caveolae
Definition
formed by the presence of caveolin dimers (formed when caveolin associates with cholesterol-rich regions in the membrane)to force the associated lipid bilayer to curve inward; formed in the surface of the cell
Term
BAR domains
Definition
a superfamily of proteins; can assemble into a crescent-shaped scaffold that binds to the membrane surface to force or favor membrane curvature
Term
5 things required for specific fusion of two membranes
Definition
1. they recognize each other
2. their surfaces become closely apposed (requires the removal of water molecules normally associated with the polar head groups of lipids)
3. their bilayer structures become locally disrupted (results in the fusion of the outer leaflet of each membrane)
4. their bilayers fuse to form a single continuous bilayer
5. the process is triggered at the appropriate time or in response to a specific signal
Term
fusion proteins
Definition
integral proteins; mediate the events of specific fusion by bringing about specific recognition & a transient local distortion of the bilayer structure that favors membrane fusion
Term
What is the relationship between v-SNAREs & t-SNAREs?
Definition
SNAREs in the cytoplasmic face of the intracellular vesicle are called v-SNAREs; those in the target membrane with which the vesicle fuses are called t-SNAREs
Term
integrins
Definition
surface adhesion proteins that mediate a cell's interaction with the extracellular matrix & with other cells (including some pathogens)
Term
cadherins
Definition
plasma membrane proteins involved in surface adhesion; undergo hemophilic interactions with identical cadherins in an adjacent cell
Term
selectins
Definition
have extracellular domains that bind specific polysaccharides on the surface of an adjacent cell in the presence of Ca2+
Term
simple diffusion
Definition
how the solute moves when two aqueous compartments containing unequal concentrations of a soluble compound or ion are separated by a permeable divider; goes from the region of higher concentration, through the membrane, to the region of lower concentration until the two compartments have equal solute concentrations
Term
membrane potential (Vm)
Definition
a transmembrane electrical gradient that exists when ions of opposite charges are separated by a permeable membrane
Term
transporters (permeases)
Definition
membrane proteins that speed the movement of a solute across a membrane by facilitating diffusion
Term
transporters
Definition
bind their substrates (molecules & ions) with high specificity, catalyze transport at rates well below the limits of free diffusion, & are saturable in the same sense as are enzymes (there is some substrate concentration above which further increases will not produce a greater rate of transport)
Term
channels
Definition
generally allow transmembrane movement of ions at rates that are orders of magnitude greater than those typical of transporters (approaching the limit of unhindered diffusion)
Term
passive transporters
Definition
transporters that simply facilitate diffusion down a concentration gradient
Term
active transporters
Definition
can drive substrates across the membrane against a concentration gradient (some use energy provided directly by a chemical reaction & some couple uphill transport of one substrate with downhill transport of another)
Term
chloride-bicarbonate exchanger (anion exchange (AE) protein)
Definition
increases the rate of HCO3- transport across the erythrocyte membrane more than a millionfold
Term
electroneutral
Definition
an exchange in which there is no net transfer of charge
Term
cotransport system
Definition
ex) the anion exchanger; simultaneously carries two solutes across a membrane
Term
antiport
Definition
the process when the two substrates move in opposite directions (ex. the anion exchanger)
Term
symport
Definition
two substrates are moved simultaneously in the same direction
Term
uniport
Definition
transporters that carry only one substrate (ex. the erythrocyte glucose transporter)
Term
active transport
Definition
results in the accumulation of a solute above equilibrium point
Term
primary active transport
Definition
solute accumulation is coupled directly to an exergonic chemical reaction (ex. conversion of ATP to ADP + Pi)
Term
secondary active transport
Definition
occurs when endergonic transport of one solute is coupled to the exergonic flow of a different solute that was originally pumped uphill by primary active transport
Term
electrogenic
Definition
when the solute is an ion & its movement without an accompanying counterion results in the endergonic separation of positive & negative charges to produce an electrical potential
Term
P-type ATPases
Definition
a family of active transporters; cation transporters that are reversibly phosphorylated by ATP as part of the transport cycle
Term
sarcoplasmic/endoplasmic reticulum Ca2+ ATPase (SERCA) pump
Definition
exists in animal tissues; works with the plasma membrane Ca2+ ATPase pump as uniporters for Ca2+ ions to maintain the cytosolic level of Ca2+ below 1 um
Term
V-type ATPases
Definition
a class of proton-transporting ATPases that are responsible for acidifying intracellular compartments in many organisms
Term
F-type ATPases
Definition
active transporters that catalyze the uphill transmembrane passage of protons driven by ATP hydrolysis
Term
Na+-glucose symporters
Definition
exist in the apical plasma membrane to take up glucose form the intestine in a process driven by the downhill flow of Na+
Term
aquaporins (AQPs)
Definition
a family of integral membrane proteins discovered by Peter Agre; provide channels for rapid movement of water molecules across all plasma membranes
Term
ion-selective channels
Definition
first recognized in neurons & now known to be present in the plasma membranes of all cells as well as in the intracellular membranes of eukaryotes; provide a mechanism for moving inorganic ions across membranes
Term
ligand-gated channels
Definition
binding of an extracellular or intracellular small molecule forces an allosteric transition in the protein which opens or closes the channel
Term
voltage-gated ion channels
Definition
a change in transmembrane electrical potential causes a charged protein domain to move relative to the membrane to open or close the channel
Term
patch-clamping
Definition
a technique developed by Erwin Neher & Bert Sakmann in 1976 in which very small currents are measured through a tiny region of the membrane surface containing only one or a few ion-channel molecules
Term
nicotinic acetylcholine receptor
Definition
a well-studied ion channel; functions in the passage of an electric signal from a motor neuron to a muscle fiber in the neuromuscular junction
Term
micelles
Definition
spherical structures that contain anywhere from a few dozen to a few thousand amphipathic molecules
Term
bilayer
Definition
a type of lipid aggregate in water; two lipid monolayers form a two-dimensional sheet
Term
vesicle
Definition
a hollow sphere formed when the bilayer sheet spontaneously folds back on itself due to the hydrophobic regions at its edges being in contact with water rendering the bilayer sheet relatively unstable
Term
peripheral membrane proteins
Definition
associate with the membrane through electrostatic interactions & hydrogen bonding with the hydrophilic domains of integral proteins & with the polar head groups of membrane lipids
Term
amphitropic proteins
Definition
found both in the cytosol & in association with membranes
Term
positive-inside rule
Definition
describes amino acid location relative to the bilayer; the positively charged Lys, His, & Arg residues of membrane proteins occur more commonly on the cytoplasmic face of membranes
Term
beta barrel
Definition
a structural motif common in bacterial membrane proteins; 20 or more transmembrane segments for beta sheets that line a cylinder
Term
porins
Definition
proteins that allow certain polar solutes to cross the outer membrane of gram-negative bacteria (ex. E. coli) that have many-stranded beta barrels lining the polar transmembrane passage
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