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Ch. 31.2-31.3
Ch. 31.2-31.3
38
Biochemistry
Undergraduate 3
02/24/2018

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Term
the sources of the C skeletons of amino acids
Definition
intermediates of...
-glycolysis
-citric acid cycle
-pentose phosphate pathway
Term
depiction of the biosynthetic families of amino acids in bacteria and plants
Definition
[image]
Term
essential amino acids
Definition
amino acids that must be obtained from the diet
Term
nonessential amino acids
Definition
amino acids that can be biosynthesized
Term
the 3 α-ketoacids that can be converted into amino acids simply by transamination (the addition of an amino group)
Definition
-α-ketoglutarate
-oxaloacetate
-pyruvate
Term
transamination rxns
Definition
transfer of an amino group
Term
equation for aspartate biosynthesis
Definition
oxaloacetate + glutamate <--> aspartate + α-ketoglutarate
Term
equation for alanine biosynthesis
Definition
pyruvate + glutamate <--> alanine + α-ketoglutarate
Term
transamination rxns are carried out by...
Definition
pyridoxal phosphate-dependent aminotransferases
Term
pyridoxal phosphate-dependent aminotransferases
Definition
enzymes that carry out transamination rxns
Term
type of rxn that participates in the synthesis of most amino acids
Definition
transamination rxns
Term
all aminotransferases contain this prosthetic group
Definition
pyridoxal phosphate (PLP)
Term
pyridoxal phosphate (PLP)
Definition
thisd is the prosthetic group of all aminotransferases
Term
pyridoxal phosphate (PLP) is derived from...
Definition
pyridoxine (vitamin B6)
Term
what pyridoxal phosphate (PLP) does in transamination rxns
Definition
accepts an amino group to form a cofactor prominent in many enzymes, pyridoxamine phosphate (PMP)
Term
depiction of the biosynthesis of serine
Definition
[image]
Term
structure of pteridine
Definition
[image]
Term
the major donor of methyl groups in biosynthetic methylation rxns
Definition
S-adenoslymethionine (SAM)
Term
S-adenoslymethionine (SAM)
Definition
this is the major donor of methyl groups in biosynthetic methylation rxns
Term
S-adenoslymethionine (SAM) is synthesized from...
Definition
methionine
Term
depiction of the synthesis of S-adenoslymethionine (SAM)
Definition
[image]
Term
depiction of the conversion of S-adenoslymethionine (SAM) into homocysteine
Definition
[image]
Term
methionine synthase aka homocysteine methyltransferase
Definition
catalyzes the transfer of a methyl group from N5-methyltetrahydrofolate
Term
methylcobalamin
Definition
mediates the transfer of a methyl group from N5-methyltetrahydrofolate; it's a cofactor for methionine synthase aka homocysteine methyltransferase
Term
methylcobalamin is derived from...
Definition
vitamin B12
Term
depiction of the activated methyl cycle
Definition
[image]
Term
how the methyl group of methionine is activated
Definition
by the formation of S-adenoslymethionine (SAM)
Term
the rate of amino acid synthesis depends mainly on...
Definition
-amount of biosynthetic enzymes
-activities of those enzymes
Term
the first irreversible step in a biosynthetic rxn
Definition
the committed step
Term
the step of a biosynthetic pathway that's often allosterically regulated
Definition
the committed step
Term
essential role of feedback inhibition (type of allosteric regulation)
Definition
conservation of building blocks and metabolic energy
Term
the regulation of branched pathways is more complicated because...
Definition
2 end products must be accounted for
Term
threonine deaminase
Definition
the PLP enzyme that catalyzes the formation of α-ketobutyrate
Term
depiction of the function of threonine deaminase
Definition
[image]
Term
depiction of the regulation of threonine deaminase
Definition
[image]
Term
enzyme multiplicity
Definition
the committed step being catalyzed by 2 or more enzymes with different regulatory properties
Term
depiction of enzyme multiplicity
Definition
[image]
Term
cumulative feedback inhibition
Definition
a common step being partly inhibited by each of the final products, acting independently

each inhibitor can reduce the activity of the enzyme, even when other inhibitors are exerting their own maximal inhibition
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