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CH 20
N/A
39
Biology
Undergraduate 1
12/09/2012

Additional Biology Flashcards

 


 

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Term
Rocombinant DNA 
Definition
A DNA molecule made in vitro with segments from different sources
Term
Biotechnology
Definition
The manipulation of organisms or their compnents to make useful products 
Term
Genetic engineering 
Definition
The direct manipulation of genes for practical purposes 
Term
Plasmids
Definition

Small, circular, doublr-stranded DNA molecules that carries accessory genes seperate from those of a bacterial chromosome

In DNA cloning, used as vectors carrying up to about 10,000 base pairs of DNA

Found in some eukaryotes (yeast)

Term

Gene cloning 

Definition
Production of multiple copies of a gene
Term
Restriction Enzymes 
Definition

An endonuclease that recognizes and cuts DNA molucules foreign to bacterium 

Cuts at specific nucleotide sequences 

Term
Restriction Site
Definition
A specific sequence on a DNA strand that is recognized and cut by a restriction enzyme 
Term
Restriction Fragments 
Definition
A DNA segment that results from the cutting of DNA by a restriction enzyme
Term
Sticky End 
Definition
A single stranded end of a double stranded restriction fragment 
Term
DNA Ligase 
Definition

A linking enzyme essential for DNA replication

Catalyzes the covalent bonding of the 3'end of one DNA fragment to the 5' end of another DNA fragment 

 

Term
Cloning Vector 
Definition

In genetic engineering, a DNA moleule tha cancarry foreighn DNA into a host cell and replicate there

Includes plasmids and NAC's, hich  move recombinant DNA from a test tube back into a cell, and viruses that transfer recombinant DNA by infection 

Term
Genomic Library 
Definition
A set of cell clones containin all the DNA segments from a genome, each within a plasmid, BAC, or other cloning cetor 
Term
Bacterial artificial chromosome (BAC)
Definition

A large plasmid that acts as a bacterial chromosome and can carry inserts of 100,000-300,000 base pairs (100-300 kb)

 

Term
Complementary DNA (cDNA)
Definition

A double stranded DNA molecule made in vitro using mRNA as a template and reverse transcriptaseand DNA polymerase

Corresponds to the exons of a gene 

Term
cDNA Library
Definition

A gene library containing clones that carry comlementary DNA (cDNA) inserts

Includes only the genes that were transcribed in the cells whose mRNA was iolated to make the cDNA 

Term
Nucleic Acid Hybridization
Definition
The process of base pairing between a gene and a complementary sequence on another nucleic acid molecule 
Term
Nucleic Acid Probe 
Definition

A labeled single-stranded nucleic acid molecule used to locate a specific nucleotide sequence in a nucleic acid sample

Molecules of the probe H-bond to the complementary sequence wherever it occurs

Term
Expression Vector 
Definition

A cloning vector that contains a highly active bacterial promoter just upstream of a restriction site where a eukaryotic gen can be inserted, allowing the gene to be expressed in a bacterial cell

Expression vectors are also available that have been genetically engineered for use in specific types of eukaryotic cells 

Term
Electroporation
Definition

A technique used to introduce recpmbinant DNA into cells by appolying a brief electrival pulse to a solution containing the cells 

Pulse creates temporary holes in the cells plama membrane, throuh which the DNA can enter

Term
Polymerase Chain Reaction
Definition
A technique usd for amplifying DNA in vitro by incubating it with specific primers, a heat resistant polymerase, and nucleotides 
Term
Gel Electrophoresis 
Definition
A technique for seperating nucleic acids or proteins on the basis of their size and electrical charge, both of which affect their rate of movement through an electric field in a gel made of polymers 
Term
Restriction Fragment Length Polymorphism 
Definition

A single nucleotide polymorphism that exists in the restriction site for a particular enzyme, thus making the site unrecognizable by that enzyme and changing the lengths of the restriction fragments formed by digestion with that enzyme 

Can be in coding or noncoding regions 

Term
Southern Blotting
Definition

a technique that enables specific nucleotide sequences to be detected in samples of DNA 

Involves gel elecrophoresis of DNA molecules and their transfer to a membrane followed by nucleic acid hybridization with a labeled probe 

Term
Northern Blotting 
Definition

A technique that enables specific nucleotide sequences to be detected in mRNA

Involves gel electrophoresis of RNA and their transfer to a membrane followerd by labelling by a probe 

Term
Reverse Transcriptase PCR (RT-PCR) 
Definition

A technique used to determine expression of a particular gene 

Uses reverse transcriptase and DNA polymerase synthesizes cDNA from all the mRNA in a sample and then subjects the cDNA to PCR amplification using primer specific for the gene of insert 

Term
in situ hybridization 
Definition
A technique that uses nucleic acid hybridization with a laelled probe to detect the location of a specific mRNA in an intact organism 
Term
DNA Microarray assays 
Definition

A method to detect and measure the expression of thousands of genes at one time

ATiny amounts of a large number of single stranded DANA fragments representing different genes are fixed to a glass slide and tested for hybridization with samples of labelled cDNA

Compare patterns of gene expression in different tissues,a at different times, under different conditions 

Term
in vitro mutagenesis 
Definition
A technique used to discover the function of a gene by cloning it, introducing specific changes into the cloned gene's sequence, reinserting the mutated gene into a cell and studying the phenotype of the mutant 
Term

RNA interference 


 

Definition

(RNAi) 

A technique used to silence the expression of selected genes 

RNAi uses synthetic double-stranded RNA molecules that match the sequence of a particular gene to trigger the breakdown of the gene's messenger RNA 

 

Term
Genome-wide association study
Definition
A large-scale analysis of the genome of many people having a certain phenotype or disease with the aim of finding genetic markers that correlate with that phenotype or disease 
Term
Single nucleotide polymorphism (SNP)
Definition
A single base-pair site in a genome where nucleotide variation is found in at least 1% of the population 
Term
Totipotent 
Definition
Describing a cell that can give rise to all parts of the embryo and adult, as well as extramembryonic membranes in species that have them 
Term
Stem cell
Definition
A relatively unspecialized cell that can prouce, during a single division, one identical daughter cell that can undergo further differentiation 
Term
Pluripotent 
Definition
Describing a cell that can give rise to many, but not all, parts of an organis 
Term
Gene therapy 
Definition
The introduction of genes into an afflicted individual for therapeutical purposes 
Term
Transgenic 
Definition
Pertaining to an organism whose genome contains a gene introduced from another organism of the same or different species 
Term
Genetic Profile 
Definition
An individual's unique set of genetic markers detected most often today by PCR or by electrophoresis an nucleic acid probes 
Term
Short Tandem Repeats 
Definition

Simple sequence DNA containing multiple tandemly repeated units of two to five nucleoties

Variations acts as markers in STR analysis

Used to prepare genetic profiles 

Term
Genetically Modified Organisms 
Definition

(GMOs)

An organism that has acquied one or more genes by artificial means

Also known as a transgenic organism 

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