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Cell basics
USM Cell and Molecular Biology, prof. is Thom Knight, Spring 2012
30
Biology
Undergraduate 4
02/15/2012

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Term
What's special about size difference between prokaryotes and eukaryotes?
Definition
Surface-to-volume ratio is reduced for the larger Eukaryotes, hinders passive diffusion.
Term
What kind of genome does a prokaryote have?
Definition
A single circular chromosome, and sometimes plasmids
Term
What kind of ribosomes do prokaryotes have?
Definition
70S only (S = Svedbergs)
Term
What kind of cell division do prokaryotes do?
Definition
Mitosis ONLY
Term
Prokaryotes and eukaryotes, who's got a cytoskeleton?
Definition
Only eukaryotes
Term
What's special about Eukaryotes?
Definition
*Nucleus and organelles
*Nuclear genome AND mitotic genome MAYBE chloroplastic genome
*Bigger, less surface-to-volume
Term
What kind of ribosomes do Eukaryotes have?
Definition
70S and 80S. 70S only in mitochondria/chloroplasts, and nucleus. 80S only in cytosol.
Term
How do most antibiotics disrupt cells?
Definition
By interrupting ribosome activity, usually only 70S.
Term
What's endosymbiontic theory?
Definition
Chloroplasts and mitochondria used to be free living prokaryotes. Today they cannot survive independently because they have limited protein synthesis ability.
Term
What's RuBisCo do?
Definition
It fixes CO2 into sugars. 8 small subunits are made outside the chloroplast, and 8 large subunits made inside chloroplast. Hence chloroplast cannot survive on own.
Term
How do transcription and translation differ in prokaryotes and eukaryotes (very broadly)
Definition
Eukaryotes do transcription in the nucleus, and translation in the cytosol.

Prokaryotes don't separate them.
Term
What cell components have a double membrane (not a bilayer, but two membranes)
Definition
The nucleus (also called "envelope")
Mitochondria
Chloroplasts
Term
What cell parts have a single membrane?
Definition
*Endoplastic reticulum (both)
*Golgi apparatus
*Transport vesicles
*Peroxisome
Term
What's chromatin?
Definition
DNA and histone proteins
Term
What's an advantage of sequestering your genome in a nucleus?
Definition
It keeps DNA away from the nucleases in the cytosol
Term
What happens inside the nucleoulus?
Definition
Ribosomes are made
Term
What is the function of nuclear membrane pores?
Definition
They let *correctly assembled* RNA and ribosomes pass into the cytosol, and protein components for assembling ribosomes pass in.
Term
What are the major parts of the mitochondrion?
Definition
*Inner/outer membrane
*Matrix (the central area)
*Inter-membrane space
*Cristae (wrinkles that add surface area to inner membrane)
Term
Where does the Citric Acid Cycle take place, and what does it do roughly?
Definition
Takes place in mitochondrial matrix.
Breaks C-C bonds, makes NADH and CO2
Term
Where does oxidative phosphorylation take place?
Definition
On an electron transport chain along the inner membrane of the mitochondrion.
Term
What are the parts of a chloroplast?
Definition
*Inner/outer membrane
*Stroma, the fluid filling the lumen
*Thylakoids, stacks of grana
Term
Where do the "light reactions" take place?
Definition
on the thylakoid membrane.
Term
Where do the "light-independent" reaction take place?
Definition
In the stroma of the chloroplast lumen.
Term
What are some things chloroplasts can change into?
Definition
*Chromoplasts - pigment containing organelles
*Amyloplasts - starch-containing organelles
*Leucoplasts - store starches, proteins, or oils
Term
What's rough ER do? how's it work? (broadly)
Definition
Takes mRNA from nucleus and translates it into proteins.

A free ribosome runs into mRNA in cytosol. The first few AAs coded for by mRNA are a *signal sequence* that makes Signal Recognition Particle (SRP) that lets the ribosome bind to the outer side of rough ER, and spit the protein into the lumen of the ER.
Term
What's the smooth ER do, and how?
Definition
No ribosomes, just modifies proteins. Fills up with modified proteins until it buds off some membrane into a transport vesicle. Because it's always losing membrane, it also is involved in membrane synthesis.
Term
How do transport vesicles from the smooth ER make their way to the golgi?
Definition
They have *snare proteins* that let them hook onto golgi membrane and fuse. After the golgi is done, it switches the snare proteins for ones tagged for the plasma membrane.
Term
What does the Golgi apparatus do?
Definition
It receives proteins from Smooth ER, packages them into transport vesicles and tags them for new destinations. These vesicles fuse with their destination membranes, and help regenerate the cell membrane.
Term
What are the parts of the Golgi, and what do they do?
Definition
*Cisternae - the membrane structures, sort of folded onto each other
*Cis-face - the side that receives vesicles from smooth ER
*Trans-face - side that ships out vesicles to their final destination
Term
What's a peroxisome do?
Definition
It contains enzymes that work with H2O2, and keeps the H2O2 out of the cytosol where it would do harm. Uses *catalases* to detoxify H2O2.
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