Shared Flashcard Set

Details

Biology I Exam 3
n/a
132
Biology
Undergraduate 1
07/08/2012

Additional Biology Flashcards

 


 

Cards

Term
ATP synthase
Definition
a complex of several membrane proteins that functions in chemiosmosis with adjacent electron transport chains
Term
Photosynthesis
Definition
generates organic molecules and O2 that power cellular respiration which releases ATP and generates CO2 and H2O
Term
ATP synthase makes ATP by...
Definition
using the energy of a hydrogen ion concentration gradient to make ATP.
Term
ATP synthase are found in...
Definition
the inner mitochondrial membranes of eukaryotic cells and in the plasma membranes of prokaryotes
Term
Beta oxidation
Definition
a metabolic sequence that breaks fatty acids down to two carbon fragments that enter the citric acid cycle as acetyl CoA
Term
Cellular respiration
Definition
the catabolic pathways of aerobic and anaerobic respiration
Term
Cellular respiration purpose
Definition
breaks down organic molecules and use an electron transport chain for the production of ATP
Term
Chemiomosis
Definition
An energy coupling mechanism, most ATP synthesis in cells occurs by this
Term
Chemiomosis purpose and example
Definition
uses energy stored in the form of a hydrogen ion gradient across a membrane to drive cellular work
synthesis of ATP
Term
Citric acid cycle
Definition
A chemical cycle involving eight steps that completes the metabolic breakdown of glucose molecules begun in glycolysis by oxidizing acetyl CoA to carbon dioxide
Term
Cytochrome
Definition
An iron-containing protein that is a component of electron transport chains in the mitochondria and chloroplasts of eukaryotic cells and the plasma membranes of prokaryotic cells.
Term
Citric acid cycle occurs...(where)
Definition
within the mitochondrian in eukaryotic cells and in the cytosol of prokaryotes
Term
Electron transport chain
Definition
A sequence of electron carrier molecules (membrane proteins) that shuttle electrons down a series of redox reactions that release energy used to make ATP
Term
Faculative anaerobe
Definition
An organism that makes ATP by aerobic respiration if oxygen is present but that switches to anaerobic respiration or fermentation if oxygen is not present.
Term
Glycolysis
Definition
A series of reactions that ultimately splits glucose into pyruvate.
Term
Glycolysis occurs...
Glycolysis is the starting point for:
Definition
in almost all living cells; fermentation or cellular respiration
Term
Lactic acid fermentation
Definition
Glycolysis followed by the reduction of pyruvate to lactate, regenerating NAD+ with no release of carbon dioxide.
Term
NAD
acts as...
Definition
Nicotinamide adenine dinucleotide
a coenzyme that cycles easily between oxidized (NAD+) and reduced (NADH) states
Electron carrier
Term
Obligate anaerobe
cannot use..
Definition
An organism that only carries out fermentation or anaerobic respiration
oxygen
Term
Proton-motive force
Definition
The potential energy stored in the form of a proton electrochemical gradient, generated by the pumping of hydrogen ions (H+) across a biological membrane during chemiosmosis
Term
Redox reaction
Definition
A chemical reaction involving the complete or partial transfer of one or more electrons from one reactant to another; short forreduction-oxidation reaction.
Term
Reducing agent
Definition
the electron donor in a redox reaction
Term
Reduction
Definition
The complete or partial addition of electrons to a substance involved in a redox reaction.
Term
Substrate level phosphorylation
Definition
The enzyme-catalyzed formation of ATP by direct transfer of a phosphate group to ADP from an intermediate substrate in catabolism.
Term
Action spectrum
Definition
A graph that profiles the relative effectiveness of different wavelengths of radiation in driving a particular process.
Term
Bundle-sheath cell
Definition
In C4 plants, a type of photosynthetic cell arranged into tightly packed sheaths around the veins of a leaf.
Term
C3 plant
Definition
A plant that uses the Calvin cycle for the initial steps that incorporate CO2 into organic material, forming a three-carbon compound as the first stable intermediate.
Term
C4 plant
Definition
A plant in which the Calvin cycle is preceded by reactions that incorporate CO2 into a four-carbon compound, the end product of which supplies CO2 for the Calvin cycle.
Term
Calvin cycle
Definition
The second of two major stages in photosynthesis (following the light reactions), involving fixation of atmospheric CO2 and reduction of the fixed carbon into carbohydrate.
Term
CAM plant
Definition
A plant that uses crassulacean acid metabolism, an adaptation for photosynthesis in arid conditions
Term
CAM plant process
Definition
carbon dioxide entering open stomata during the night is converted to organic acids, which release CO2 for the Calvin cycle during the day, when stomata are closed.
Term
Carbon fixation
Definition
The initial incorporation of carbon from CO2 into an organic compound by an autotrophic organism
Term
Autotrophic organism
Definition
a plant, another photosynthetic organism, or a chemoautotrophic prokaryote
Term
Carotenoid
Definition
An accessory pigment, either yellow or orange, in the chloroplasts of plants and in some prokaryotes.
Term
Carotenoids broaden...
Definition
the spectrum of colors that can drive photosynthesis
Term
Chlorophyll
Definition
A green pigment located in membranes within the chloroplasts of plants and algae and in the membranes of certain prokaryotes.
Term
Chlorophyll a
Definition
A photosynthetic pigment that participates directly in the light reactions, which convert solar energy to chemical energy.
suggests violet blue and red work best for photosynthesis
Term
Chlorophyll b
Definition
An accessory photosynthetic pigment that transfers energy to chlorophyll a.
absorbs blue and orange light
Term
Crassulacean acid metabolism
Definition
An adaptation for photosynthesis in arid conditions
Term
Crassulacean acid metabolism process
Definition
a plant takes up CO2and incorporates it into a variety of organic acids at night; during the day, CO2 is released from organic acids for use in the Calvin cycle.
Term
Cyclic electron flow
Definition
A route of electron flow during the light reactions of photosynthesis that involves only photosystem I and that produces ATP but not NADPH or O2.
Term
Electromagnetic spectrum
Definition
The entire spectrum of electromagnetic radiation, ranging in wavelength from less than a nanometer to more than a kilometer.
Term
Gylcealdhyde 3-phosphate
Definition
A three-carbon carbohydrate that is the direct product of the Calvin cycle; it is also an intermediate in glycolysis.
Term
Heterotroph
Definition
an organism that obtains organic food molecules by eating other organisms or substances derived from them
Term
Light-harvesting complex
Definition
A complex of proteins associated with pigment molecules that captures light energy and transfers it to reaction-center pigments in a photosystem.
Term
Pigment molecules
Definition
chlorophyll a, chlorophyll b, and carotenoids
Term
Light reactions
Definition
convert solar energy to the chemical energy of ATP and NADPH, releasing oxygen in the process
Term
Light reactions occur
Definition
on the thylakoid membranes of the chloroplast or on membranes of certain prokaryotes
Term
Linear electron flow
Definition
a route of electron flow during the light reactions of photosynthesis that involves PS I and II
Term
Linear electron flow produces
Definition
ATP, NADPH and O2
Term
Linear net electron flow
Definition
H2O to NADP
Term
Mesophyll
Definition
leaf cells specialized for photosynthesis
Term
Mesophyll location in C3 and CAM plants
Definition
located between the upper and lower epidermis
Term
Mesophyll locations in C4 plants
Definition
between bundle-sheath cells and the epidermis
Term
NADP
Definition
an electron acceptor that temporarily stores energized electrons produced during the light reactions
Term
PEP carboxylase
acts prior to
Definition
An enzyme that adds CO2 to phosphoenolpyruvate (PEP) to form oxaloacetate in mesophyll cells of C4 plants
photosynthesis
Term
Photon
Definition
A quantum of light energy that behaves as if it were a particle.
Term
Photophosphorlylation
Definition
The process of generating ATP from ADP and phosphate by means of chemiosmosis
Term
Photophosphorlylation functions by
Definition
using a proton-motive force generated across the thylakoid membrane of the chloroplast or the membrane of certain prokaryotes during the light reactions of photosynthesis.
Term
Photorespiration
Definition
A metabolic pathway that consumes oxygen and ATP, releases carbon dioxide, and decreases photosynthetic output.
Term
Photorespiration occurs on
Definition
hot dry bight days
when the stomata close and the O2/CO2 ratio in the leaf increases, favoring the binding of O2 rather than CO2 by rubisco
Term
Photosynthesis
Definition
the conversion of light energy to chemical energy that is stored in sugars or other compounds
Term
Photosystem
Definition
A light-capturing unit located in the thylakoid membrane of the chloroplast or in the membrane of some prokaryotes, consisting of a reaction-center complex surrounded by numerous light-harvesting complexes
Term
PS I
Definition
A light-capturing unit in a chloroplast's thylakoid membrane or in the membrane of some prokaryotes; it has two molecules of P700 chlorophyll a at its reaction center.
Term
PS II
Definition
One of two light-capturing units in a chloroplast's thylakoid membrane or in the membrane of some prokaryotes; it has two molecules of P680 chlorophyll a at its reaction center.
Term
Primary electron acceptor
Definition
a specialized molecule that shares the reaction-center complex with a pair of chlorophyll a molecules and that accepts an electron from them.
Term
Primary electron acceptor located...
Definition
in the thylakoid membrane of a chloroplast or in the membrane of some prokaryotes,
Term
Rubisco
Definition
the enzyme that catalyzes the first step of the Calvin cycle
Term
Stoma
Definition
A microscopic pore surrounded by guard cells in the epidermis of leaves and stems that allows gas exchange between the environment and the interior of the plant.
Term
Thylakoid
Definition
A flattened, membranous sac inside a chloroplast, their membranes contain molecular “machinery” used to convert light energy to chemical energy.
Term
Visible light
Definition
That portion of the electromagnetic spectrum that can be detected as various colors by the human eye, ranging in wavelength from about 380 nm to about 750 nm.
Term
Wavelength
Definition
the distance between crests of waves such as those of the electromagnetic spectrum
Term
Energy from catabolism
Definition
exergonic, releases ATP and H2O
Term
Energy for cellular work
Definition
endergonic, releases ADP and P1
Term
Oxidation
Definition
removal of electrons from ions or molecules
Term
Oxidation leads to the ____ of _____
Definition
loss; C-H or C-C bonds
Term
Reduction
Definition
adding electrons to ions on molecules allowing the amount of positive charge to be reduced
Term
Electron receptor
Definition
oxidizing agent involved in reduction
Term
Reduction leads to the ____ of _____
Definition
gain; C-H or C-C bonds
Term
Catabolic pathways
Definition
yield energy, exergonic
Term
Fermentation
Definition
partial degradation of sugars that occur without O2
Term
Aerobic respiration
Definition
consumes organic molecules and O2 and yields ATP
Term
Glycolysis generates
Definition
2 puruvate, 2 H2O, 2 ATP, 2 NADH and 2H
Term
Glycolysis process
Definition
partial oxidation of glucose to form 2 pyruvic acids molecules, electrons removed are added to the electron carrier NAD, energy released by partial oxidation of glucose
Term
Glycolysis major phases, describe
Definition
Energy investment phase: 2 ATP used (one by hexo, one by phosphofructo)
Energy pay off phase: 4 ATP made (two by phospho, two by pyruvate kinase)
Term
Electron transport chains components
Definition
multiprotein complexes
Term
Electron transport chain carriers
Definition
alternate reduced and oxidized states as they accept and donate electrons
Term
Cellular respiration energy flows
Definition
glucose > NADH > ETC > proton-motive force > ATP
Term
Beta oxidation yields
Definition
acetyl CoA, NADH, FADH2
Term
Feedback inhibition
Definition
ATP concentration begins to drop, respiration speeds up; when there is plenty of ATP, respiration slows down
Term
Alcohol fermentation
Definition
pyruvate turns to ethanol and CO2, used in brewing, winemaking, and baking
Term
Lactic acid fermentation
Definition
pyruvate reduced to NADH turns to lactate, used by muscle cells with O2 is scarce
Term
Obligate anaerobes
Definition
carry out fermentation or anaerobic respiration and cannot survive in the presence of O2
Term
Pyruvate
Definition
fork in metabolic road that leads to two alternative catabolic routes
Term
Evolutionary significance-glycolysis
Definition
ancient prokaryotes are though to have used glycolysis long before there was O2 in the atmosphere
Term
Photosynthesis formula
Definition
6 CO2 + 12 H2O + Light energy → C6H12O6 + 6 O2 + 6 H2O
Term
Photosynthesis is a ______ process
Definition
endergonic
Term
Light reaction
located in
Definition
split H2O, release O2, reduce NADP to NADPH, generate ATP from ADP by photophosphorylation
Thylakoid
Term
Calvin cycle
located in
Definition
Forms sugar from CO2, using ATP and NADPH, begins with carbon fixation, cycle builds sugars from smaller molecules by using ATP and reducing power of electrons carried by NADPH
stroma
Term
Calvin cycle turns carbon from _____ to ______
Definition
CO2; the sugar G3P
Term
Synthesis of G3P
Definition
the cycle must take place 3 times, fixing 3 molecules of CO2
Term
Autotrophs
Definition
producers
sustain themselves without eating anything derived from other organisms
Term
Photoautotrophs
Definition
using the energy of sunlight to make organic molecules from H2O and CO2
Term
Heterotrophs
examples
Definition
consumers
obtain their organic material from other organisms
humans, depend on photoautotrophs for food O2
Term
Chloroplasts location
Definition
thylakoids, mainly in cells of mesophyll
Term
Stomata
Definition
pores on leaves, CO2 enters and O2 exits
Term
stroma
Definition
a dense interior fluid in chloroplasts
Term
Splitting of water
Definition
incorporates electrons of hydrogens into sugar molecules and releases oxygen as by-product
done by chloroplast into hydrogen and oxygen
Term
light
Definition
form of electromagnetic energy
Term
absorption spectrum
Definition
a graph plotting a pigments light absorption vs. wavelengths
Term
action spectrum
Definition
profiles the relative effectiveness of different wavelengths of radiation in driving a process
Term
Action spectrum was demonstrated by
Definition
Theodor W. Engelmann
exposed different segments of algae to different wavelengths
areas receiving wavelengths favorable to photosynthesis produced excess O2
Term
Cyclic electron flow
Definition
only used PS I and produces ATP, may protect cells from light-induced damage
Term
ATP and NADPH are produced... (where)
Definition
on the side facing the stroma (outside the thylakoid), where the calvin cycle takes place
Term
James Watson and Francis Crick
Definition
1953
introduced double helical for DNA, A-T G-C
Term
Semiconservative model
Definition
predicts that when a double helix replicated, each daughter molecule will have one old strand and one new
Introduced by Watson and Crick
Term
T.H. Morgan
Definition
early 1900s
genes are located on chromosomes
DNA and protein become candidates for genetic material
Term
Frederick Griffith
Definition
1928
discovered genetic role of DNA
used bacteria to establish genotype and phenotype
Term
Oswald Avery, Maclyn McCarty, Colin MacLeod
Definition
1944
announced that the transforming substance was DNA
experiment used heat to inactive DNA RNA and proteins
Term
Bacteriophages
Definition
used in molecular genetic research
Term
Alfred Hershey and Martha Chase
Definition
performed experiments showing that DNA is genetic material of a phage known as T2
Term
Erwin Chargaff
Definition
reported that DNA composition varies from one species to the next
Term
Chargaff's rules
Definition
the base composition of DNA varies between species
In any species the number of A and T bases are equal and the number of G and C bases are equal
Term
Maurice Wilkins and Rosalind Franklin
Definition
used x-ray crystallography to study molecular structure, which produced a picture of DNA
Term
Matthew Messelson and Franklin Stahl
Definition
supported semiconservative, labeled nucleotide of the old strands with a heavy isotope of nitrogen
Term
DNA replication
Definition
the copying of DNA, replication begins at particular sites called origins, strands are separated, opening up a replication bubble
Term
Replication fork
Definition
new DNA strands are elongating at the end of each replication bubble
Term
Helicases
Definition
enzymes that untwist the double helix at the replication fork
Term
Single-strand binding proteins
Definition
bind to and stabilize single-stranded DNA
Term
Topoisomerase
Definition
corrects overwinding ahead of replication fork by breaking, swiveling, and rejoining DNA strands
Term
DNA polymerases
Definition
can't initiate synthesis of polynucleotide, only can add nucleotides to 3' end
Term
RNA primer
Definition
short, initial nucleotide strands
Supporting users have an ad free experience!