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BIOLOGY EXAM 2 CHAPTER 8
CHAPTER 8 NOTES
48
Biology
Undergraduate 1
10/02/2012

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Term
metabolism
Definition
the totality of an organism's chemical reactions is called _________. it is an emergent property of life that arises from orderly interactions between molecules 
Term
Metabolic Pathway 
Definition
A _________ _______ begins with a specific molecule, which is then altered in a series of defined steps, resulting in a certain product. Each step fo the pathway is catalyzed by a specific enzyme. 
Term
Catabolic Pathways 
Definition
Metabolism as a whole manages the materia land energy resources of the cell. Some metabolic pathways release energy by breaking down complex molecules to simpler. Theses degradative processes are called _________ _______.
Term
Cellular Respiration 
Definition
A major pathways of catabolism is _________ ________, in which the sugar glucose and other organic fuels are broken down in the presence of oxygen to carbon dioxide and water. (pathways can have more than one starting molecule and/or product) Energy that was stored in the organic molecules becomes available to do the work of the cell.
Term
Anabolic Pathways 
Definition
Consume energy to build complicated molecules from simpler ones; they are sometimes called biosynthetic pathways. Example: the synthesis of an amino acid from simpler molecules
Term
Energy 
Definition
The capacity to cause change. It is the ability to rearrange a collection of matter, it exits in various forms, and the work of life depends on the ability of cells to transform energy from one form to another. 
Term
Kinetic Energy
Definition
Energy can be associated with the relative motion of objects; this energy is called _____ ____. Moving objects can perfom work by imparting motions to other matter.
Term
Heat/Thermal Energy 
Definition
the kinetic energy associated with the random movement of atoms or molecules.
Term
Potential Energy 
Definition
An object not presently moving may still possess energy. Energy that is not kinetic is called _________ ____; it is energy that matter possesses because of its location or structure.
Term
Chemical Energy 
Definition
term referred to the potential energy available for release in a chemical reaction.
Term
Thermodynamics 
Definition
The study of the energy transformations that occur in a collection of matter is called ___________.
Term
The first law of thermodynamics 
Definition

o   Energy can neither be created nor destroyed only converted from one form to another

Term
The second law of Thermodynamics 
Definition

o   When converting energy from one form to another the amount of useful energy decreases

Term
Entropy 
Definition
Lack of order or predicatbility; gradual decline into disorder 
Term
Entropy
Definition
Every energy transfer or transformation increases the _____ of the universe 
Term
Spontaneous Process
Definition
For a process to occur on its own, without outside help, it must increase the entropy of the universe. A process that can occur without an input of energy is called a ____________ ______. (enthalpy decreases, entropy increases)
Term
Non-Spontaneous
Definition
A process that cannot occur on its own is said to be ______________; it will happen only if energy is added to the system. (Enthalpy increases, entropy decreases)
Term

1)less

2)lower

3)very

Definition

NON-LIVING SYSTEMS

____ organized

____ lower

____ slow

Term

1)highly

2)high

3)fast 

Definition

LIVING SYSTEMS

_____ organized

____ energy

____

Term
Free Energy 
Definition
portion of a system's energy that can perform work when temperature and pressure are uniform throughout the system, as in a living cell.
Term
Chemical Reactions
Definition
occur anytime two or more atoms, ions, or molecules collide in such a way that they produce a new substance 
Term

1)Decreases

2)stable

Definition

In a spontaneous change:

The free energy of a system _______

The system becomes more _____

The release free energy can be harnessed to do work.

Term

1)Decreases

2)increases

Definition

If entropy increase, free energy _______

If entropy decreases, free energy ______

Term

1)decreases

2)positive or zero

3)spontaneous

Definition
Every spontaneous process _____ the system's free energy, and processes that have a ______ or ____ (G) are never ________
Term
Activation Energy 
Definition
Slows down the Reaction (controls speed)
Term
Exergonic
Definition
Spontaneous Reaction proceeds with a net release of free energy (G is negative for an _________ reaction) 
Term
Decrease
Definition
The greater the _______ in free energy, the greater the amount of work that can be done
Term
Endergonic
Definition
Reaction that absords free energy from its surroundings (G is positive) Such reactions are non-spontaneous
Term

1)equillbrium

2)equillbrium

Definition
Systems at ______ are at a minimum of G(free energy) and can do no work, a cell that has reached metabolic __________ is dead
Term
Chemical Work 
Definition

TYPE OF WORK A CELL DOES

-the pushing of endergonic reactions that would not occur spontaneously, such as the synthesis of polymers from monomers

Term

1)equillbrium

2)equillbrium

Definition
Systems at ______ are at a minimum of G(free energy) and can do no work, a cell that has reached metabolic __________ is dead
Term
Transport Work
Definition

TYPE OF WORK A CELL DOES

-the pumping of substances across membranes against the direction of spontaneous movement

Term
Mechanical Work
Definition

TYPE OF WORK A CELL DOES 

-the contraction of muscle cells, and the movement of chromosomes during cellular reproduction (such as the beating of cilia)

Term

1)energy coupling

2)energy coupling

Definition
A key feature in the way cells manage their energy resources to do this work is ______ _______, the use of an exergonic process to drive an endergonic one. ATP is responsible for mediating most ______ ______ in cells, and in most cases it acts as the immediate source of energy that powers cellular work. 
Term
ATP (adenosine triphosphate)
Definition
Contains the sugar ribose, with the nitrogenous base adenine and a chain of three phosphate groups bonded to it. In addition to its role in energy coupling, ___ is also one of the nucleoside triphosphates used to make RNA
Term

1)Hydrolysis

2)adenosine diphosphate 

Definition
The bonds between the phosphate groups of ATP can be broken by _______. When the terminal phosphate bond is broken by addition of a water molecule, a molecule of inorganic phosphate leaves the ATP; which becomes _____________ ____________..
Term

1)proteins

2)chemical

2)transport

3)mechanical

Definition
The cell's ______ harness the energy released during ATP hydrolysis in several ways to perform the three different types of cellular work: _______,________,________
Term

1)hydrolysis

2)shape

Definition
ATP ______ leads to the change in a protein's _____ and often its ability to bind to another molecule 
Term

1)enzyme

2)catalyst

3)enzymes

Definition
An ____ is a macromolecule that acts a _____, a chemical agent that speeds up a reaction without being consumed by the reaction. Without the regulation by _____, chemical traffic through the pathways of metabolism would become terribly congested because many chemical reactions would take such a long time.
Term
Thermal Energy
Definition
activation energy is often suppiled in the form of _____ energy (heat) that the reactant molecules absorb from the surroundings. 
Term
activation
Definition
Enzymes speed reactions up by reducing the ___________ energy
Term

1)Substrate

2)Substrate 

Definition
The reactant an enzyme acts on is referred to as the enzyme's _______. Then enzyme binds to its _____ forming an enzyme _____ complex. 
Term

1)Specific

2)Specific

Definition
The reaction catalyzed by each enzyme is very ______; an enzyme can recognize its specific _____ even among closely related compounds. 
Term

1)proteins

2)proteins

3)shape

Definition
What accounts for molecular recognition? Recall that most enzymes are ______, and ______ are macromolecules with unique three-dimensional configurations. The specificity of an enzyme results from its _____, which is a consequence of its amino acid sequence 
Term
Active Site 
Definition
Only a restricted region of the enzyme molecule actually binds to the substrate. This region is called the ____ ___, is typically a pocket or groove on the surface of the enzyme where catalysis occurs.
Term

1)active site

2)substrate 

Definition
The specificity of an enzyme is attributed to a compatible fit between the shape of the _____  ____ and the shape of the _______
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