Term
Describe the process of DNA relication on the leading and lagging strands. Include:
DNA Pol I
DNA Pol III
Helicase
Ligase
Primase
Single-stranded DNA binding protein
Topoisomerase |
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Definition
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Term
| When adding a nucleotide to a DNA replication, what is added? |
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Definition
Raw material = deoxynucleoside triphosphate (dNTP)
dATP
dTTP
dCTP
dGTP |
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Term
| What is the byproduct of DNA Replication? |
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Definition
| pyrophosphate (two phosphates linked together) |
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Term
| What bonds are formed in DNA replication? |
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Definition
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Term
| What is a phosphodiester bond? |
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Definition
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Term
| What happens when something goes wrong with DNA Replication? |
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Definition
Would create a mutation..
1)Contemporaneous with synthe sisi
DNA Pos 'proofread' taking incorrect bases back off |
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Term
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Definition
| when DNA Pols take incorrect bases off |
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Term
| In error correction, what two things must occur with synthesis? |
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Definition
Contempoaneous with synthesis
Subsequent to synthesis
Mismatches or damage cause kinks in DNA helix
When a kink is detecte. the offending DNA is removed, then replaced by Pol I and the gaps are glued together by ligase |
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Term
| How does DNA replication differ in eukaryote? |
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Definition
- Have multible linear chromosomes
- DNA replication begins at multiple orgins of replication
- It progesses outward in bothe directions- bidirectionally
- Each replication fork of each replication bubble copies both strands
- X
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Term
| Descibe how prokaryote process okazaki fragments vs eukaryotew |
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Definition
Pol I comes in and chews up primer in Prokaryotes
RNA primer is pealed off the template and clipped off. ligase seals the gap EUK |
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Term
| What are potential problems at the end that eukaryotes have? |
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Definition
Eykaryotes have linear chromosomes
DNA polymerase needs to buold on an existing primer. so you can't replicate the very end- the chromosome would get shorter with each round of replication |
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Term
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Definition
| Eukaryotic chromosomes have a reptitive sequence on each end that protects them from this progessive shortening through the action of the enzyme telomerase |
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Term
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Definition
An enzyme made up of both protein and RNA (ribonucleoprotein) that carries its own template and this lets it add lost repeats back to the telomeres
telomerase becomes less active with age |
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Term
| What effect does a small change in the DNA sequence have on phenotype? |
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Definition
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Term
| What is the central dogma? |
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Definition
| An understanding the way information flows, from DNA>RNA>Protein |
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Term
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Definition
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Term
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Definition
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Term
| Describe the process of Transcription |
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Definition
(taking DNA letters to RNA letters)
RNA synthesis using DNA template
RNA polymerase uses one DNA strand as template to make complementary strand
makes RNA 5' to 3' |
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Term
| What are the two types of DNA strands? |
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Definition
| DNA template strand, DNA coding strand |
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Term
| What happens with the two strands in DNA transcription? |
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Definition
| DNA template strand separates from DNA coding strand. The DNA template strand then pairs with mRNA. |
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Term
| What does the coding srand do in transcription? |
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Definition
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Term
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Definition
| 5' to 3' using template strand as the template |
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Term
| What has the same sequence as RNA? |
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Definition
| The coding strand except t>u |
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Term
| What are the three phases of transcription? |
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Definition
Initiation-start
Elongation-do it
Termination-finish |
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Term
| What occurs during initiation? |
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Definition
- Transcription factors bind DNA at specific sequences where RNA synthesis is to begin(promoter)
- Bound factors load RNA polymerase
- RNA polymerase/transcription factor complex melts the DNA
- RNA polymerase starts making RNA (no primer is needed)
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Term
| What occurs during elongation? |
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Definition
RNA polymerase makes RNA
- DNA template
- Ribonucleoside trophosphate (not deoxyribose)
(NTPs vs dNTPs) and (U sub for T) |
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Term
| What occurs in termination of Transcription |
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Definition
Disrupts transcription complex Different between bacteria (x2) and eukaryotes |
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Term
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Definition
| what binds DNA where RNA synthesis is to begin |
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Term
| What is/ what isn't needed in elongation of transcription? |
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Definition
No primase needed No separate helicase needed No SSB needed Needs Topoisomerase |
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Term
| Why isn't helicase needed in elongation of transcription? |
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Definition
| polymerase works twice undoing itself |
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