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BIOL 1306
Bio chapter 4
30
Biology
Undergraduate 2
02/08/2011

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Term
Organic chemistry
Definition
study of carbon compounds
Term
The () of a molecule often determines its function
Definition
shape
Term
every grouping of a carbon bonded to four other atoms has a () shape
Definition
Tetrahedron
Term
When two carbon atoms are joined by a double bond,
Definition
all bonds around those carbon are in the same plane.
Term
Carbon, with a valance of 4, can bond to various other atoms, including O, H, and N. Carbon can ansl bond to other carbom atoms, forming the carbon skeletons of organic compounds. (T/F)
Definition
True.
Term
Hydrocarbon
Definition
consisting of a carbon and a hydrogen
Term
Although hydrocarbons arent prevalent in living organisms, many of the cells organic molecules have hydrocarbon parts. (T/F)
Definition
True
Term
carbon skeletons of organic molecules vary in length and shape. (T/F)
Definition
True
Term
Isomers are
Definition
compounds with the same molecular formula but different structures and properties.
Term
What are the three types of isomers?
Definition
structureal isomers, genetic isomers, and enentiomers.
Term
What's a structural isomer?
Definition
differ in the covalent arrangement of their atoms.
Term
What's a geometric isomer?
Definition
same covalent partnerships, but differ int hewir spatial arrangements.
Term
Enatiomer
Definition
Isomers that are mirror images of eachotehr.
Term
chemical groups effect molecular functions by being directly involved in chemical reactions. TF
Definition
T
Term
Hydroxyl group
Definition
(-OH) hydrogen atom bonded to an oxygen. The name of the compound are alcohols. It's polar (-) and can form hydrogen bonds with water molecules. Don't confuse this with Hydroxide ions (OH-)
Term
Carboxyl group
Definition
When an oxygen atom is double bonded to a carbon atom that is also bonded to an -OH. Entire assembly is a carboxyl group.

Compound: Carboxylic acid

An example is acetic acid.

It has acidic properties because the covalent bond between oxygen and hydrogen is so polar.

Found in cells in ionized 1- form.
Term
Carbonyl Group
Definition
carbon atom joined to an oxygen atom by a double bond.

Ketones if the carbonyl group is within a carbon skeleton

Aldehydes if the carbonyl group is at the end of the skeleton

Acetone - Ketone

Propanyl - Aldehyde

Ketone and an aldehyde may be structural isomers with different properties, as is the case for acetone and propanyl.

Two groups also found in sugars.
Term
Amino
Definition
A nitrogen atom bonded to two hydrogen atoms and to the carbon skeleton.

Also called Amines. Glycine is an example.

Acts as a base; can pick up an H+ from the surrounding solution.

In cells, it's ionized with a charge of 1+.
Term
Sulfhydril
Definition
Sulfer hydrogen bond.

Thiols

Cysteine.

To sulfhydrol groups can react, forming a covalent bond. This "cross-linking" helps stabilize protien structure.

Cross linking of cystines maintains curliness/straightness in hair.
Term
Phosphate
Definition
Phosphorous bonded to four oxygen atoms.

Organic phosphates

Glycerol pgosphate provides the backbone for phospholipids, the most prevalent molecules in cell membranes.

Negatively charged. Can react with water.
Term
Methyl
Definition
1 carbon bonded to three hydrogen.

Methylated compound

An example is methylated cytinide.

Effects sex hormones and expression of genes.
Term
what is ATP
Definition
adenosine triphosphate
Term
The carbon atom is tetravalent; this means that _____.
Definition
a carbon atom can complete its valence shell by forming four covalent bonds
Term
Which of the following are properties of hydrocarbons?
Definition
Hydrophobic, nonpolar, good source of stored energy
Term
Glucose and hexanoic acid each contain six carbon atoms, but they have completely different properties. Glucose is a nutrient found in food; hexanoic acid is poisonous. Their differences must be due to different _____.
Definition
functional groups
Term
Which one of the following molecules has a carboxyl functional group?
Definition
R-COOH
Term
Which of the following molecules is a weak acid?
Definition
R-COOH
Term
Which of the following functional groups is associated with a release of energy that cells can harvest to perform many functions?
Definition
Correct. Cleaving a phosphate group from ATP releases energy that is used to perform many cellular functions.
Term
-COO-
Definition
The ionized or dissociated carboxyl group may be written as _____.
Term
What are the six most important chemical elements of life?
Definition
Carbon, nitrogen, oxygen, hydrogen, phosphate, sulfur
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