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BIOL 101
test 2
91
Biology
Undergraduate 3
02/22/2009

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Term
heterozygous/hybrid
Definition
individual has a pair of nonidentical alleles (Aa)
Term
allele
Definition
1)alternate form of a gene.
2) all molecular forms of the same gene
Term
gamete
Definition
a sex cell, sperm or egg
Term
asexual reproduction
Definition
one parent gives rise to two identical offspring. Done by prokaryotes, single celled eukaryotes, some multi-celled organisms, some somatic (body) cells in multicellular organisms
Term
sexual reproduction
Definition
2 parents--> offspring not identical to either parent.
Term
Eukaryotic Cell cycle
Definition
Composed of interphase (90% of the time) and mitosis (10% of the time)
Term
Interphase
Definition
made up of G1 (Gap 1), S (Synthesis), and G2 (Gap 2)
Term
G1
Definition
Gap 1 in interphase. It is the gap before DNA synthasis. Cell increases number or duplicates the organelles. It also grows in size.
Term
Synthesis
Definition
In interphase. DNA replication. Chromosomes replicate and remain joined at their centrometers, creating sister chromatids. 46-->92. Continued growth of cell.
Term
G2
Definition
in interphase, Gap 2. It's after DNA synthesis. Protein synthesis, general metabolic activity (making ATP and more protein)
Term
Mitosis
Definition
second phase of eukaryotic cell cycle. made up of prophase, metaphase, anaphase, and telophase/cytokinesis
Term
prophase
Definition
DNA is condensing, coiling more. The nuclear envelope and nucleous begin to break up and disappear. A spindle made up of microtubules begins to form, with one end joined to one sisted chromatid at its kinetochore at the centromeric region; the other end joins to pole at microtubule organizing center (MTOC) or centrioles(in animal cells). Sister chromatids move towards center of the cell.
Term
kinetochore
Definition
[image]is the protein structure on chromosomes where the spindle fibers attach during division to pull the chromosomes apart.
Term
metaphase
Definition

[image]

sister chromatids are metaphase plate. Spindle is fully formed. The spindles which are not attached to chromatids attach to other spindle fibers from opposite pole. The nuclear envelope disappears.

Term
chromatid
Definition
one among the two identical copies of DNA making up a replicated chromosome, which are joined at their centromeres, for the process of cell division (mitosis or meiosis).
Term
anaphase
Definition
sister chromatids separate to chromosomes. Spindles joined to chromosomes shorten. the spindles joined to opposing spindle fibers lengthen a elongate the cell.
Term
Telophase/Cytokinesis
Definition

[image]

begins once all chromosomes at spindle poles. Nuclear envelopes and nucleoli reappear, spindle disappear. cytokinesis (splitting of cytoplasm) occurs. In animals- microfilaments pinch the cell at the equator to form 2 cells. Plants can't pinch like that b/c of cell wall, but they form cell plate, and vesicles of cellulose align and fuse at the equator and form two cells.

Term
somatic cell
Definition
any cell that is not a gamete.
Term
homologous chromosomes
Definition
two chromosomes that are nearly identical (one from dad, one from mom). They have the same genes in the same location, but may have different versions of those genes
Term
autosomes
Definition
chromosomes 1-22, the ones found in both males and females
Term
sex chromosomes
Definition
chromosomes that determine sex. 23rd pair of chromosomes. XX=female, XY=male.
Term
Diploid cells
Definition
They're somatic. 2 sets of chromosomes(2n). they are formed by mitosis from a diploid cells
Term
haploid cells
Definition
(gamete) A single set of chromosomes (n). Formed by meiosis from a diploid cell.
Term
Meiosis
Definition
Chromosome number reduced by one half (a diploid in either the testes or ovaries give rise to over 4 haploid gametes) Used by specialized reproductive cells. It keeps genetic material from doubling with each generation, and shuffle genes which creates variation. Also has interphase, prophase I, metaphase I, telophase I and cytokenis, Prophase II, Telophase II.
Term
Prophase I
Definition

[image]

chromatids are aligned as tetrads (two chromosomes, with one chromosome coming from each parent). Synapsis ('crossin over') is when DNA breaks homologous chromosomes,and rejoins between non-sister chromatids creating hybrid chromosomes.

Term
metaphase I
Definition
tetrads align(instead of sister chromatids like in mitosis) at the metaphase plate. . one pair of sister chromatids joined to one pole and the other pair joined to the other pole
Term
anaphase I
Definition
homologs separate (tetrad breaks)
Term
Telophase I and Cytokenesis
Definition
Spindle disappears, depending on species- nuclear envelopes and nucleoi may reappear, and DNA may uncoil. Cytokinesis results in 2 daughter cells
Term
Prophase II
Definition
DNA is condensing, coiling more. The nuclear envelope and nucleous begin to break up and disappear. A spindle made up of microtubules begins to form, with one end joined to one sister chromatid at its kinetochore at the centromeric region; the other end joins to pole at microtubule organizing center (MTOC) or centrioles(in animal cells). Sister chromatids move towards center of the cell.
Term
Telophase II
Definition

[image]

begins once all chromosomes at spindle poles. Nuclear envelopes and nucleoli reappear, spindle disappear.

Term
total number of combinations in a diploid
Definition
2^n
Term
Random fertilization
Definition
(2^n)(2^n)
Term
Principle of Segregation
Definition
Diploid cells have pairs of genes on pairs of homologous chromosomes. the two genes of each pair are segregated from each other during meiosis, so they end up in different gametes
Term
Genes
Definition
units of information about specific traits
Term
Pure breeding/homozygote
Definition
have two identical alleles (AA or aa)
Term
dominant allele
Definition
expressed allele in a heterozygote
Term
recessive allele
Definition
masked allele in a heterozygote
Term
genotype
Definition
allelic composition of a gene
Term
Phenotype
Definition
expressed type.
Term
tester
Definition
an organism that is homozygous recessive for all genes being examined
Term
Multiple alleles
Definition
3 or more alleles for one gene rather than just 2
Term
Codominance
Definition
when two dominant alleles are expressed in heterozygote.
Term
Incomplete Dominance
Definition
one allele of a pair is not fully dominant over the other in a heterozygote, so an intermidiate phenotype is observed
Term
Rare Autosomal Dominant Disorders
Definition
need one dominant allele to have disease. Affected individuals usually have one affected parent. Ex. Huntington disease, achordroplasia (dwarfism)
Term
Rare autosomal recessive disorders
Definition
Need 2 copies of the recessive allele to have the disease. Affected individuals usually have unaffected parents. Inbreeding increases frequency in population. EX. Cystic fibrosis, sickle cell anemia
Term
rare sex-linked recessive disorders
Definition
Male inherits only one X, so one recessive allele is needed n males to have disease (females need 2 copies). males usually have unaffected parents. Inbreeding inceases frequency in population. Ex. hemophilia, Duchennes muscular dystrophy, colorblindness
Term
Abnormal number of chromosomes(aneuploidy) in humans
Definition
caused by errors in meiosis, when chromosomes don't separate properly. Non-disjuction in meiosis I- homologs don't separate properly, all abnormal gametes (chromo 21-down syndrome). Non-disjunction in meiosis II- sister chromatids don't separate.
Term
Aneuploidy
Definition
abnormal number of chromosomes. Monosomy-losing one chromosome, only have one copy of a chromosome, person dies. Trisomy- gaining one chromosome, only compatible with life if it is chromo 21 (down syndrome). The risk of this happening increases as the mother's age increase b/c eggs are arrested in prophase I(tetroids and synapsis)
Term
Aneuploidy in sex chromosomes
Definition
1.XXY – Kleinfelter syndrome - males, sterile, feminization
2. XYY – male, normal
3. XO – Turner’s syndrome – female, sterile, broad webbed neck, short
4. XXX – female, normal
Term
Fred Griffith
Definition
showed that the genetic material could be transferred
Term
Oswald Avery, Colin MacLeod, Maclyn McCarty
Definition
built on Griffith's rat experiment; concluded that DNA, not protein, carries genetic material.
Term
Fred Griffith
Definition
showed that the genetic material could be transferred and it’s not damaged by heat
Term
Alfred Hershey and Martha Chase
Definition
1. Studied T2 bacteriophage = virus that infects bacteria made only of DNA and proteins
2. Two batches of phages with:
a. Radioactively labeled protein (S35) only
b. Radioactively labeled DNA (P32) only

3. Infected bacteria with the two batches, agitated, spun to separate phage proteins (light) and bacteria cells (heavy).
a. Results when proteins labeled: liquid above
b. Results when DNA labeled: pellet (bacteria) was radioactive
Concluded that DNA is genetic material
Term
Edwin Chargraff
Definition
base pair equality, says that the ration of C:G and the ratio of A:T in DNA are 1:1
Term
Rosalind Franklin and Maurice Wilkins
Definition
used X-ray diffraction as their main tool. their data suggested a helix of some sort.
Term
James Watson and Francis Crick
Definition
helix diameter is uniform, determined that there were two helices. Determined that the bases paired A-T, C-G
Term
nucleotides
Definition
phosphate group, sugar, and nitrogen base
Term
DNA is made up of..
Definition
2 long polynucleotides--each of which is made up of phosphate group, deoxyribose sugar, and a nitrogen base (A, G, C, T). bases bond with each other with hydrogen bonds.
Term
DNA replication
Definition
First- mitosis or meiosis(specifically during the S subphase of interphase. 2- because the parent strand is conserved during the process, half of every doublestrand is old and half is new. this is termed semiconscructive or semiconservative replication. 3- helicase- enzymes that breaks hydrogen bonds between bases to unwind DNA into single strands.4- DNA polymerase- enzyme that adds nucleotides to growing DNA polymer. It only adds nucleotide to the 3' end of a nucleotide. Because of the anitparallel nature of DNA and because of the replication fork only moves in one direction, the replication is continuous on one strand and discontinuous on the other.
Term
"central dogma of life"
Definition
DNA->mRNA-->protein
Term
DNA bases code for 20 amino acids
Definition
3 nucleotide sequence, 64 combos
Term
Transcription
Definition
one of 2 DNA strands is the template, rewritten into the 'language' of RNA. this strand is called the template. complimentary strand of... G--> C, A--> U, C--> G, T--> A. The transcript goes from nucleous to cytoplasm via nuclear pores
Term
Translation
Definition
translate the mRNA into the language of proteins (with help of transfer RNA). Uses codons. Takes place in cytoplasm. Needs mRNA for instructions, ribosome to from peptide bonds, tRNA to carry amino acids, free amino acids and enzymes that attach amino acids to tRNAs. stages: initiation, elongation, temination
Term
Codon
Definition
A triplet of nitrogen bases. Codes for one amino acid. More than one codon codes for one amino acid.
Term
Transcription in eukaryotes
Definition
takes place in nucleus. RNA polymerase adds RNA nucleotides to the 3' end of a growing mRNA. single stranded DNA template. RNA nucleotide.
Term
promoter
Definition
signal for start of transcription; specific sequence right before gene.
Term
terminator
Definition
sequences that signal 'stop' of transition.
Term
Post-transcription processing of mRNA
Definition
addition of 5’ cap; addition of 3’ poly-A-tail; splicing are removed, and exons are spliced together
Term
introns
Definition
non-coding sequence in a gene
Term
exons
Definition
expressed sequence
Term
tRNA
Definition
they carry appropriate amino acid and recognize the appropriate codon in mRNA. They have a anticodon structure- triplet sequence complementary to a specific mRNA codon. Also has a AA attachment site, for the amino acids.
Term
Ribosomes
Definition
bring mRNA and tRNA together, and form peptide bonds between amino acids. It is made up of large and small subunits made of RNA and protein. P site is where growing tRNA binds. A site is for tRNA which is bringing in amino acids.
Term
AUG sequence on mRNA
Definition
start of mRNA. Methionine
Term
UAA, UAG, UGA sequence on mRNA
Definition
stops translation codons
Term
initiation
Definition
small subunit of the ribosome binds mRNA. large and small subunits clamp together. Initiates tRNA(met) sites in the Psite
Term
elongation
Definition
codon recognition- - tRNA recognizes codon and brings appropriate AA to mRNA
Peptide bonds are formed when two amino acids are linked in the P and A sites. Translocation occurs (tRNA carrying the growing amino acid chain moves to the P-site; empty tRNA leaves the P-site)
Term
Termination
Definition
recognition of the stop codons--> polypeptide is freed.
Term
mutation
Definition
a spontaneous change in DNA during replication of DNA. before mitosis or meiosis. can also occur due to ionizing radiation, since it could cause double stranded breaks in DNA. Also non-ionizing radiation, cause frameshift mutation. last, chemicals can cause base substitutions. Can be single base pair change, base insertion or deletion (cause frame shifts- evey codon downstream of mutation changes). Each unique structure and mutation can lead to different structure, which leads to different function. mutation in somatic cells lead to cancer. Mutations in germ cell(pre-gamete) can lead to a germline mutation, which means the trait wil be inherited and be part of the family's pedigree.
Term
Asparagine
Definition
AAU and AAC
Term
Alanine
Definition
GCU, GCC, GCA, and GCG.
Term
Threonine
Definition
ACU, ACA, ACC, and ACG
Term
Phenylalanine
Definition
UUU and UUC
Term
Arginine
Definition
CGU, CGC, CGA, CGG, AGA, and AGG
Term
Leucine
Definition
UUA, UUG, CUU, CUC, CUA, and CUG.
Term
Serine
Definition
UCU, UCC, UCA, UCG, AGU and AGC.
Term
Lysine
Definition
AAA and AAG.
Term
Blood types
Definition
Ia, Ib, or i.. Ia+Ia=A; Ia+i=A; Ia+Ib=AB; Ib+Ib=B; Ib+Ib=B; ii=O
Term
George Cuvier
Definition
catastrophism- idea that abrupt changes in the geologic or fossil record resulted from large scale disasters that were divinely invoked.
Term
Jean Lamarck
Definition
inheritance of acquired characteristics- changes in an individual's body form and functioning then the individual passed on the changes, acquired during its lifetime, to offspring
Term
Charles Lyell
Definition
wrote principles of geology. first flirted with the idea of evolution.
Term
X-linked recessive inheritance
Definition
Androgen insensitivity; Color blindness; Fragile X syndrome; Hemophilia; Muscular dystrophies; X-linked anhidrotic
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