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BioChemistry Keywords Ch39
BioChemistry DPPP-368 Keywords Chapter 39
27
Biochemistry
Undergraduate 3
03/30/2011

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Term
alpha-ketobutryate
Definition
q
Term
cystathionase --
Definition
This enzyme, along with the cofactor pyridoxal phosphate, catalyzes the hydrolysis of cystathionine to cysteine, ammonium ion (NH4+), and alpha-ketobutyrate. This reaction serves as a branch point for the pathways leading to the disposition of methoinine sulfur during the catabolism of that amino acid and the anapleurotic pathway that converts alpha-ketobutyrate to the TCA cycle intermediate succinyl CoA. (cf. fig. 39.12, p. 737). Deficiency of this enzyme or its cofactor, synthesized from Vitamin B6, is characterized by cystathionuria but no other clinical abnormalities; it is considered a benign disorder (cf. clinical note sidebar, p. 738).
Term
cystathionine --
Definition
Product of the cystathionine synthase reaction in the methionine catabolism/cysteine synthesis pathway that combines serine and homocysteine.
Term
cystathionine synthase --
Definition
This enzyme catalzes the reaction homocysteine + serine --> Cystathionine + H20. Its absence leads to increased methionine and homocysteine levels and decreased cystathionine and cysteine levels (cysteine is later in the pathyway). This was seen in the case of Homor Sistine as discussed in the text.
Term
Cysteine --
Definition
synthesized from the carbons and nitrogen of serine and the sulfur of homocysteine (derived from methionine) Pg. 737.
Term
dihydrobiopterin
Definition
q
Term
Essential Amino Acid --
Definition
Nine amino acids are essential due to the fact that the carbon skeleton cannot be synthesized which means these amino acids must be obtained from the diet. The essential amino acids are: Histidine, Isoleucine, Leucine, Lysine, Methionine, Phenylalanine, Threonine, Tryptophan, and Valine. (Arginine only required for growth)
Term
FH4
Definition
q
Term
glucogenic amino acids -->
Definition
The catabolism of these amino acids leads to the formation of pyruvate or TCA cycle intermediates. These amino acids are important for anaplerotic reactions of the TCA cycle, as well as gluconeogenesis. All amino acids EXCEPT for lysine and leucine are glucogenic.
Term
glycine
Definition
q
Term
homocysteine -->
Definition
With serine, eventually forms cysteine via the cystathionine synthase and cystathionase reactions (cf. fig. 39.12, p. 737).
Term
Homocysteine -->
Definition
Derived from methionine metabolism and can be converted back into methionine by using both methyl-FH4 and vitamin B12 Pg. 751 (Ch. 40)
Term
hydroxylation -->
Definition
a chemical process that introduces a hydroxyl group (-OH) into an organic compound.
Term
ketogenic amino acid -->
Definition
The catabolism of these amino acids leads to the formation of ketone bodies. Lysine and Leucine are purely ketogenic amino acids. Isoleucine, tryptophan, phenylalanine and tyrosine are ketogenic and also glucogenic.
Term
Methionine -->
Definition
required for synthesis of SAM and is obtained from the diet or produced from homocysteine, which accepts a methyl group from vitamin B12. Can be regenerated from homocysteine by a reaction that requires both FH4 and vitamin B12. Pg. 742, Pg. 760 (Ch. 40)
Term
5,10-methylene tetrahydrofolate
Definition
q
Term
mixed function oxidase
Definition
q
Term
phenylalanine
Definition
q
Term
phenylalanine hydroxylase
Definition
q
Term
phenylketoneuria
Definition
q
Term
phenylpyruvate
Definition
q
Term
PKU -->
Definition
Phenylketonuria is a rare condition where new borns have the inability to break down the amino acid phenylalanine. Phenylalanine plays a role in the bodys pigment production of melanin and thus babies with PKU have lighter skin, eyes and hair than their siblings. Other symptoms include seizures, delayed mental and social skills, skin rashes, tremors, hyperactivity and mental retardation. PKU is a treatable disease that involves a diet with low levels of phenylalanine. The most common form of PKU, called classic PKU, results from the absence of the phyenylalanine hydroxylase enzyme which catalyzes the breakdown of phylalanine to tyrosine. This reaction is: phylalanine + BH4 + O2 --> Tyrosine + BH2 + H20
Term
pyruvate
Definition
q
Term
serine
Definition
q
Term
succinyl CoA-->
Definition
an intermediate of the citric acid cycle, it is synthesized to ?-ketoglutarate by ?-ketoglutarate dehydrogenase, coenzyme A is added also during this time, succinyl Co A is synthesized from propionyl CoA.
Term
Tetrahydrofolate (FH4) -->
Definition
a coenzyme that is used to transfer one-carbon groups at various oxidation states. Used in both amino acid degradation and biosynthesis Pg. 731
Term
Tetrahydrobiopterin (BH4) -->
Definition
a cofactor that is required for ring hydroxylation reactions. The reactions involve molecular oxygen and one atom of oxygen is incorporate into the product. BH4 is important for the synthesis of tyrosine and neurotransmitters. Pg. 731 & 734.
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