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Biochemistry Final
Diseases and Drugs
246
Biochemistry
Graduate
10/21/2012

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Term
Respiratory Acidosis
Definition
Lower pH
Hypoventilation
Decreased lung function, hypoventilation
Asthma, obesity, bronchitis, sedatives/anesthetics
Term
Respiratory Alkalosis
Definition
Raise pH
Hyperventilation
Hyperventilation
Anxiety/pain, high altitude, mechanical hyperventilation
Term
Metabolic Acidosis
Definition
Lower pH
Decreased HCO3
Prolonged vomiting, excretion of HCO3, Excess H+, Using up HCO3 to buffer
Renal Failure, Methanol Poisoning, diabetic ketoacidosis
Term
Metabolic Alkalosis
Definition
Raise pH
Increased HCO3
Overdose of OTC antacids
Vomiting, gastric aspiration, diuretics
Term
6. HbM (methemoglobin)
Definition
Fe2+ is oxidized to Fe3+; patients with a lot of HbM have bluish tint
Term
7. α & β thalassemia
Definition
reduced synth of alpha or beta chain; reduces amount of Hb that can form  anemia
Term
8. Sickle cell anemia
Definition
1. Hemoglobinopathy
2. Substitution of Glu for Val in beta chain creates STICKY HYDROPHOBIC PATCH
i. In R-form patch is shielded
ii. In T-form patch exposed  hydrophobic effect causes T- form to polymerize into fibers that distort RBC
Term
9. Scurvy
Definition
i. Hydroxylation of Proline & Lysine requires Vit C, Fe2+ and alpha-ketoglutarate
ii. Insufficient hydroxylysine  prevent proper formation of EC covalent crosslinks and glycosylation
iii. Vit C deficiency  scurvy  weak defective collagen
Term
10. Ehlers Danlos
Definition
1. Skin hyperextensibility
2. Joint hypermobility
3. Collagen mutation
4. Bowel and arterial rupture
Term
11. Prion disease
Definition
1. Demonstrates effects of protein misfolding
i. Only difference b/t prion and normal PRO is folding
2. Proteinaceous infectious particles
3. Accumulation of protease resistant isoforms in CNS
i. aggregations of amyloid plaque on the brain
4. Inherited, acquired, sporadic
5. SYMPTOMS: ataxia, dementia, paralysis
6. PrPc (normal) : 40% alpha helices
7. PrPsc (scrapies) : 45% beta sheet % 30% alpha helices
i. Examples in Humans
1. Creutzfeldt-Jako disease (CJD)
2. Kuru – 1st prion disease in humans
3. vCJD (variant CJD) – linked to BSE (bovine spongiform encephalopathy)
4. sporadic fatal insomnia
Term
8. Myasthenia Gravis
Definition
i. Autoimmunity to Nicotinic Ach-Receptors on NM jxn
1. Muscle weakness
2. Prevent muscle contraction
3. Treatment
a. Anticholinesterase  increase Ach
b. Immunosuppressive drugs
Term
9. Digitalis
Definition
narrow therapeutic window
1. Inhibits Na/K ATPase
2. Increase contractile force
3. Slow HR and respiration
Term
10. Alpha-toxin
Definition
i. Ie. Cobratoxin, conotoxin, bungarotoxin, tubocurarine
ii. BLOCK nicotinic-Ach-Receptors
1. PARALYSIS
2. Ie. Cobratoxin, conotoxin, bungarotoxin, tubocurarine
a. Treatment
3. Anticholinesterase  increase Ach
Term
12. Zellweger Syndrome
Definition
i. Peroxisomes  Synth Plasmlogens (lipids)  Myelin component
ii. Zellweger Syndrome– Can’t form functional PEROXISOMES = myelination disorder
iii. Hypotonia, mental disorder, high forehead, broad, flat nasal bridge
Term
13. Cystic Fibrosis
Definition
i. Cystic Fibrosis
1. Loss of CFTR function
a. Cl- not transported, so H2) won’t follow
b. RESULT: accumulation of Thick mucus in lungs
Term
14. Viagra
Definition
i. cGMP phosphodiesterase inhibitor  increased cGMP levels following NO release
ii. Blood vessels remain relaxed  increased blood flow to penis
iii. Cialis & Levitra also cGMP phosphodieastrase inhibitors
Term
15. Cholera Toxin
Definition
i. ribosylates Gs protein causing Gs to remain ACTIVE
ii. Gs continually activates adenylate cyclase  increase cAMP  activate PKA  phosphorylates CFTR  OPEN CFTR  Cl- INTO INTESTINAL LUMEN  influx of H2O, Na+, HCO3-, and K+.  diarrhea
iii. ARGININE on Gs is ribosylated
1. Symptoms
a. MASSIVE Diarrhea and ensuing Dehydration then Death
b. Cystic Fibrosis carriers may be less susceptible to cholera
Term
16. Whooping Cough
Definition
i. Pertussis Toxin causes ribosylation of Gi Protein.
ii. Inhibits Gi  prevents inhib of adenylate cyclase  increased cAMP
iii. CYSTEINE on Gi is ribosylated
Term
17. Bubonic Plague
Definition
i. YopH is a PRO Tyr Phosphotase
ii. YopH dephosphorylate key proteins that coordinate the immune response
1. Prevents host from mounting defense
Term
18. Niacin Deficiency (B3) –
Definition
i. B3 provides the pyridine ring derivative of NAD/NADP, which is the site that undergoes oxidation or reduction.
1. Niacin Deficiency  pellagra : symptoms – dermatitis, diarrhea, dementia, death
Term
19. Riboflavin Deficiency (B2) –
Definition
i. B2 provides heterocyclic ring structure of FAD/FMN that is the site involved in oxidation/reduction reactions.
1. Riboflavin is light sensitive, so treatment of neonatal hyperbilirubinemia can lead to riboflavin deficiency
Term
PDH Deficiency (Biotin Deficiency)
Definition
a. PDH can’t convert pyruvate from CHO to form acetyl CoA => diminished ATP production via CAC
b. Pyruvate is instead reduced by NADH to form lactate
c. Causes: serum lactic acidosis
d. Fatal, neurological disorders
Term
2. Thiamin Deficiency
Definition
a. Beri-Beri - characterized by muscle atrophy and weakness
i. Polished rice diets lack thiamin
ii. Wet beri-beri: edema & cardiac failure
iii. Dry beri-beri: no fluid retention
b. Thiamin is required by PDH & alpha-KG-DH
c. What organs/tissues are most affected
i. Mainly the nervous system because of the reliance of the brain on CHO metabolism for energy
d. Early Symptoms: loss of appetite, constipation, nausea, fatigue, depression, peripheral neuropathy
e. Advanced Symptoms (alcoholics): confusion, ataxia, loss of eye coordination (opthalmoplegia or Wernicke-Korsakoff Syndrome)
f. Susceptible Population: Elderly, Alcoholics, Low income
Term
3. DNP Uncoupling of ox-phos
Definition
a. cytoplasm – DNP has O- group and H+ line the cytosolic side of the inner membrane  DNP picks up H+, now OH group is permeable to membrane
b. Inner Membrane – hydroxylated DNP dissolves into the membrane  DNP moves into matrix by mass action.
i. Note that the conc grad is reduced, thus free energy is lost, creating HEAT
1. Matrix –DNP carries H+ back into the matrix, dissipating the conc grad w/o ATP formation
Term
a. CN-
Definition
Binds Fe3+ on cytochrome oxidase (complex IV) inhibiting e- transport
i. Block e- transport  no e- flow to molecular O2  e- carriers fully reduced
ii. Lack of e- flow  block H+ pumping by ETS complexes  INHIBITION OF ATP FORMATION  NADH reduces pyruvate to Lactate (lactate accumulates)  lactic acidosis
iii. Same thing happens when no O2 is available to accept e- from ETS
iv. CN- Treatment
1. Rapidly administer nitrites via inhalation and injection to get CN- to release from oxidase and bind to Hb via mass action (much more Hb than oxidase)
2. Then administer sodium thiosulfate to convert CN- to non-toxic thiocyanate
Term
b. CO
Definition
i. Limits O2 availability  no e- flow to O2  fully reduced e- carriers  block H+ pumping by ETS complexes  INHIB ATP FORMATION
ii. CO Treatment
1. Administer 100% O2 or hyperbaric chamber to INCREASE O2 for ETS and displace CO from Hb iron
Term
a. Leber’s Hereditary Optic Neuropathy (LHON)
Definition
i. Sudden onset blindness due to Optic n. death
ii. Mutation of Complex I
Term
b. MERRF
Definition
i. Abnormally shaped mito w/ paracrystalline arrays
ii. Cytochrome oxidase (complex IV) activity diminished
iii. Point mutation in mitochondrial gene for Lys tRNA
Term
c. MELAS
Definition
i. Muscle specimens w/ ragged red fibers
ii. Cytochrome oxidase activity NORMAL
iii. Point mutation in gene for Leu tRNA
Term
6. HbA1c
Definition
i. Measures patient compliance of glucose management
ii. Detectable for 120 days ( RBC lifespan) in blood serum
iii. Increase glucose  increased HbA1c
b. AGE’s
i. PROs reduced by open chain glucose
ii. Potentially dangerous to tissues
iii. Modify EC PRO structures
c. Glucose  Sorbitol
i. Sorbitol – implicated in diabetes
d. Reducing Sugar Test
i. Sugar in urine reduces substrate on test strip
ii. Indicates glucose & galactose, sorbitol
Term
7. artificial sweeteners
Definition
a. Aspartame (NutraSweet)
i. Not a sugar
ii. metabolized to Phe + Asp
b. Saccharine (Sweet n Low)
i. Not a sugar
ii. Not metabolized -- excreted
c. Sucralose (Splenda)
i. Polychlorinated sucrose
ii. Not metabolized – NO EFFECT ON INSULIN (safe for diabetics)
Term
8. Lactose Intolerance
Definition
a. Lactose is readily digested by normal flora  methane gas + H+ = gas/bloating
Term
9. Sucrase/isomaltase deficiency
Definition
a. Diarrhea
b. If disaccharide is not cleaved it cannot be taken up by the intestines  osmotically active so influx of H2O into intestine  diarrhea
Term
10. Raffinose
Definition
a. A sugar abundant in beans that cannot be digested by humans
1. Normal flora breakdown raffinose  gas/bloating
Term
11. Pyruvate Kinase Deficiency
Definition
i. PEP pyruvate + ATP
ii. Regulation step of glycolysis
iii. Stimulated by: F-1,6- BPG & insulin
iv. Feedback inhibition by ATP
Term
12. Fructose Intolerance
Definition
a. Enzymatic Deficiency
i. aldolase B
1. F-1-P  DHAP + glyceraldehyde
ii. F-1-P accumulates in liver, with serious effects
1. Liver phosphate pools depleted and liver cannot breakdown glycogen
2. Liver tissue is damaged and liver function decreases
b. Treatment
i. Strictly fructose free diet
c. Not to be confused with Essential Fructosuria
i. Enzymatic deficiency
1. Fructokinase (liver)
2. Fructose not utilized excreted
3. Rare & HARMLESS
Term
13. Galactosemia
Definition
a. Failure to use galactose in glycolysis
b. Enzymatic defects
i. Galactokinase
1. Galactose  Gal-1-P
ii. Gal-1-P uridyltransferase MOST COMMON
1. Gal-1-P  UDP-Gal
iii. UDP Gal epimerase
1. UDP-Gal  UDP-Glucose
c. Result
i. Liver damage, cataracts, intellectual disability
ii. Newborns present with feeding difficulty, jaundice, lethargy, and hepatomegaly
d. Detection
i. Galactose or Gal-P in urine
e. Treatment
i. Galactose free diet
ii. Do not breast feed
Term
14. arsenic
Definition
a. Arsenic mimics phosphate
i. Normal: 1,3- BPG  3- PG + 1ATP
ii. Arsenate: 1,3 –BPG  Arsenate - 3-PG  3 -PG
1. In the presence of arsenate, glycolysis does not produce ATP!
2. Glycolysis is the sole energy source of RBCs
3. Arsenate  RBC death = hemolytic anemia
Term
15. How do defects in glycolytic enzymes affect RBCs?
Definition
a. Result in hemolytic anemia
b. Glycolysis is the RBC main energy source
c. No ATP  can’t maintain membrane potential  cell death
d. F-1,6-BPase deficiency
i. Liver unable to generate glucose leads to hypoglycemia and accumulation of fat on liver
ii. F-1,6-BP –[F-1,6-BPase] F-6-P
1. This is the key regulatory step to convert F-1,6-BP to glucose
iii. Symptoms
1. Glucagon will have no ability to counter hypoglycemia, because glucose can’t be liberated from gluconeogenic pathways
iv. Treatment
1. Avoid fasting
Term
16. PPP defects
Definition
i. Common in African American men
ii. X-linked recessive
iii. PPP can’t generate NADPH for reduction of glutathione in RBCs
1. RBCs become sensitive to increasing H¬2O2 levels
a. H¬2O2 causes hemolytic episodes where RBCs are inactivated by reactive O2  hemolysis when:
i. Infection: macrophages produce H2O2 and cause oxidative stress on RBCs
ii. Administration of H2O2 producing drugs (primaquine – antimalarial drug)
iii. Consumption of Fava Beans
Term
van Gierke disease
Definition
a. Defective G-6-Pase
b. Can’t export glucose
Term
Pompe Disease
Definition
a. Deficient acid maltase (alpha-glucosidase)
i. Required for degradation of glycogen that accumulates in the lysosome
ii. Cells swell up and die  cardiac or respiratory failure
Term
3. Type III: Cori Disease
Definition
a. Defective glycogen branching enzyme
i. Only non-branched outer layers of glycogen can be degraded. Glycogen still forms branches, but can’t debranch them, so glycogen granules become large
Term
4. Type V: McArdle Disease
Definition
a. Defective glycogen phosphorylase
i. Unable to utilize stored glycogen
ii. Exercise causes muscle cramps due to inability to use glycogen to supply energy for muscle
iii. Greater than normal glycogen stores
Term
Hunter
Definition
Dermatan sulfate
Heparin sulfate Iduronate sulfatase XR
Skeletal abnormalities, intellectual disability
Term
Hurler
Definition
Dermatan sulfate
Heparan sulfate a-iduronase
Treatment: enzyme replacement therapy AR
Skeletal abnormalities
Intellectual disability
Term
Sanfilippos (A,B,C,D)
Definition
Heparan sulfate
Various defects in heparin sulfate degradation AR
Severe intellectual disability
Term
19. Carnitine deficiency
Definition
i. Carnitine is needed to import FAs into mitochondria
ii. Symptoms:
1. Hypoglycemia with no detectable rise in ketone levels
a. Under these conditions most FA cannot be broken down to acetyl CoA or respond to hypoglycemia by producing ketone bodies.
2. Lethargy because cells aren’t able to utilize energy from FA metabolism.
3. Hepatomegaly because fat is stored in liver
Term
20. MCAD Deficiency (Medium Chain Acyl DH)
Definition
i. Most common Acyl CoA deficiency
ii. Clinical Presentation: non-ketotic hypoglycemia (life-threatening)
iii. Can’t degrade medium chain acyl-CoA chains to small chain acyl-CoA for transport across mito membrane  ACCUMULATION OF MEDIUM CHAIN ACYL-CoA
Term
21. a-oxidation defect
Definition
i. accumulation of undegraded phytanic acid  neurological defects
Term
22. Peroxisomal Biogenesis Problems
Definition
i. Zellweger Syndrome
1. Can’t form functional peroxisomes  decreased capacity for very long chain FA oxidation
2. Diagnosis: Accumulation of 24-26-carbon FAs
3. Result: myelination disorder
4. Symptoms: neurological defects
b. Plasmalogens contain a fatty alcohol
c. Immune system, brain, and heart are rich in plasmalogens
d. Synthesis occurs in peroxisomes
i. Synthesis of Plasmalogens
1. Acyl transfer to C1 of DHAP
2. Acyl group exchanged for fatty alcohol
3. C2 of DHAP reduced  then acyl group to C2 (from acyl-CoA)
4. Remove phosphate from C3  choline to C3 (from CDP-choline)
5.  choline plasmalogens
Term
23. acute fatty liver of pregnancy
Definition
a. Symptoms: jaundice, nausea, enlarged liver
b. Biopsy: large fat inclusions in cytoplasm of liver parenchymal cells
c. Diagnosis: Acute fatty liver of pregnancy
d. Cause: Deficiency of hydroxyacyl-CoA DH
i. Stalled degradation of long chain FAs  fat accumulation
Term
24. development of a fatty liver in chronic alcoholism
Definition
a. 3 Factors
1. High [NADH] blocks from EtOH metabolism blocks CAC enzymes and forces acetyl CoA into FA synthesis  fat deposition on liver
2. B-hydroxyacyl DH requires NAD+  Lack of NAD+ slows FA degradation  fat deposition on liver
3. Damaged liver has REDUCED capacity to SYNTHESIZE VLDLs to transport FAs to adipose tissue  fat deposition on liver
Term
25. NSAIDs and corticosteroids
Definition
a. Inhibit prostaglandin synthesis at the level of phospholipase A2 & COX
Term
26. treatment of asthma
Definition
a. Lipoxygenase inhibitor prevent the synthesis of LTC4 & LTD4 which promote smooth muscle contraction of airways
Term
27. prevention of respiratory distress syndrome in premature infants
Definition
a. Surfactant is rich in phospholipids, particularly dipalmitoyl PC
b. No PC  no surfactant
Term
Tay Sachs
Definition
B-hexosaminidase Ganglioside Gm2 Blindness, cherry red spot macula, ID
Term
Gaucher
Definition
B-cerebrosidase Glucocerebroside Liver & spleen enlargement
Erosion of bone
Term
Fabry
Definition
a-galactosidase
Ceramide trihexoside Skin rash, kidney failure
Term
Niemann-Pick
Definition
Sphingomyelinase Sphingomyelin Liver & spleen enlargement, ID
Term
Sandhoff
Definition
B- hexosaminidase A & B Gm2 ganglioside, globoside Like Tay Sachs, but progresses faster
Term
Metachromatic leukodystrophy
Definition
Arylsulfatase Sulfatide ID
Term
a. Sphingolipidoses
Definition
absence of glycosidases  accumulation of glycolipids in lysosomes of phagocytic cells (found in liver, spleen, CNS tissue, and bones
Term
b. Mucopolysaccharidoses
Definition
absence of proteoglycan-degrading enzymes  proteoglycan accumulation in lysosomes
Term
30. Gaucher’s Disease, (a type of sphingolipidoses)
Definition
a. Cause: Absence of glucocerebrosidase  accumulation of glucocerebrosides in liver, spleen, CNS tissue, & bones
b. Symptoms: bone pain, stunted growth, enlarged spleen
Term
31. regulation of cholesterol synthesis and the action of statins
Definition
a. Regulation of cholesterol:  occurs at the RLS
i. HMG-CoA –[HMG-CoA reductase] mevalonic acid
1. HMG-CoA Reductase regulated by phosphorylation and by cholesterol
ii. Inactivation
1. AMP-dependent Kinase  inactivates HMG-CoA Reductase
2. High cytoplasmic [cholesterol]  inactivates HMG-CoA Reductase
3. REDUCED BY STATINS
iii. Activation
1. Insulin-dependent phosphorylase  activates HMG-CoA Reductase
Term
32. gallstone formation
Definition
a. Bile contains
i. Cholesterol
ii. Bile salts
iii. Phospholipids
b. High [cholesterol] of bile  precipitation of cholesterol stones  get stuck in gall duct
Term
hypercholesterolemia
Definition
a. Pathology:
i. High serum cardiac troponin
ii. ECG abnormalities
iii. Elevated serum cholesterol & TGs
b. Cause: defective LDL receptor
Interesting side note: xanthomas of the knuckles and thickened Achilles tendon may indicate persistent hypercholesterolemia/hyperlipidemia
Term
1. Celiac Disease
Definition
inappropriate immune response to α-gliadin a glycoprotein in gluten
i. Reduces absorptive area of small intestine
ii. Symptoms
1. Nutrient deficiency – due to reduced absorptive area of small intestine
2. Abdominal cramps and bloating
iii. Treatment
1. Strict avoidance of gluten (a-gliadin)
Term
2. Acute pancreatitis
Definition
i. Enzymes are activated inside the pancreas rather than the duodenum.
ii. Cause
1. Alcohol
2. Infections
3. Gallstones
iii. Treatment
1. Fasting (avoid stim. of enzymes)
2. Supportive in nature
Term
3. Hartnup Disease
Definition
a. Genetic defect of large aa transporters
i. malabsorption of large neutral aa’s
ii. Same transporters also found in proximal tubules of kidneys
b. Symptoms
i. Pellagra
ii. Neutral aa’s in urine
c. Treatment
i. Niacin supplementation
Term
4. pressure ulcers
Definition
i. Pressure ulcers are localized areas of soft tissue breakdown
ii. Cause
1. Local tissue ischemia
2. Malnutrition
iii. Treatment
1. High protein nutritional support rich in Arginine
a. Nuts & seafood
b. Arg is a precursor for No an creatine
Term
5. Elevated AST (aspartate)
Definition
i. AST found in liver, heart, muscle, kidney (in descending order of concentration)
ii. Indicator of liver damage…but may also indicate myocardial infarct and other conditions
iii. OAA + Glu (AST) a-KG + Aspartate
Term
6. Elevated ALT (alanine)
Definition
i. ALT found primarily in Liver
ii. More specific indicator of liver damage
iii. Alanine(ALT) Pyruvate
b. Which is the more specific marker for hepatic damage? Why?
i. ALT is a more specific indicator of liver damage b/c it is found primarily in the liver
Term
7. PKU
Definition
a. How does PKU get its name?
i. Phenylketonuria  unable to convert Phe  Tyr
ii. Excess Phe converted to phenylpyruvate (for disposal)
iii. Urine is high in phenylpyruvate
b. What 2 different enzyme defects can cause PKU?
i. Phe Hydroxylase
ii. DHBtn Reductase
c. What is the metabolic basis for PKU pathology?
i. Missing/ defective Phe Hydroxylase or DHBtn Reductase
d. Treatment
i. Low Phe diet supplemented with Tyr
e. Why should patients with PKU avoid aspartame (Nutrasweet)?
i. Aspartame  Asp + Phe + methanol
1. Patients with PKU accumulate phenylpyruvate which causes brain damage
Term
8. MEGALOBLASTIC ANEMIA
Definition
a. Deficiency of B12  N5-methyl-THF accumulation
b. Deficiency of B12  decrease in oxidized form of THF, N5, N10 methylene-THF, which is required for synthesis of thymidine and purine rings  prevent DNA replication  MEGALOBLASTIC ANEMIA
Term
9. pernicious anemia
Definition
a. Causes
i. Deficient Vit B12 intake
ii. Lack of intrinsic factor (produced by parietal cells in stomach)
iii. Inability to absorb (ileum)
iv. Lack of transcobalamin (transport)
b. Demyelination  Neurological problems
i. 2 theories for why demyelination occurs
1. Defective Methylmalonyl-CoA mutase causes branch chain FAs to incorporate into myelin  demyelination
Odd-chain FAs  propionyl COA D- methylmalonyl CoA  L-methylmalonyl CoA --(B12/mutase)  succinyl CoA

2. Defective Methionine synthase – unknown mechanism, but patients treated successfully with methionine supplementation
Homocysteine + N5 methyl THF –(B12/methionine synthase) Met + THF
Term
10. atherosclerosis.
Definition
a. High [homocysteine]  atherosclerosis
i. Homocysteine
1. has a toxic effect that damages the endothelial cells of blood vessels
2. it oxidizes LDL
3. Interferes with blood clotting system
b. Homocysteine requires B6, B12, and folate….B vit supplementation lowers homocysteine levels, but has not been shown to prevent atherosclerosis
Term
11. maple syrup urine disease?
Definition
a. Defective BCKDH (branched chain a-ketoacid DH)
b. Can’t break down branched chain a-ketoacids  makes urine smell like maple syrup
c. Symptoms
i. Poor feeding
ii. Vomiting
iii. Slow, irregular breathing
iv. Ketoacidosis
v. Hypoglycemia
vi. Neurological damage
vii. Death
d. Treatment
i. Dietary restriction on sources of BCAA
1. However, some essential amino acids are BCAAs
ii. Infants die w/in 4-7 days if untreated
iii. Common in Mennonites
Term
12. SEVERE HYPERAMMONEMIA
Definition
1. Carbomoyl phosphate synthase I defect
2. Ornithine transcarbomoylase defect
ii. Liver Disease patients cannot metabolize ammonia generated by breakdown of nitrogenous compounds in food  hyperammonemia
iii. Symptoms
1. Lethargy
2. Stupor
3. Vomiting
4. Convulsions
5. Swelling of brain (astrocytes)
a. Astrocytes are site where Glu + NH4+--(Glutaminase)  Gln
b. Glu is a common NT in brain. So it is released by neurons then picked up by astrocytes and converted to Gln as shown above.
c. During hyperammonemia there is an increase in Gln inside the astrocytes, which cause water influx into the cells
i. This is an elementary explanation – mechanism is complex and poorly understood
b. TREATMENT of HYPERAMMONEMIA: 2 drugs
1. Phenylbutyrate  phenylacetate  phenyl acetyl-CoA + Gln phenylacetylglutamine (water soluble and excreted through kidney; eliminates 2 nitrogen)
2. Benzoate  benzoyl CoA + Gly  hippurate (water sol. And excreted via kidney ; eliminates 1 nitrogen)
*Net result is to pull nitrogen from the usual urea cycle precursors into Gly and Gln, which are eliminated as conjugates via the kidney
Term
13. albinism
Definition
i. defective tyrosinase¬¬  no melanin
ii. Tyr –(tyrosinase) DOPA  dopaquine  colored melanin
Term
14. pellagra
Definition
a. Niacin deficiency
i. Cause
b. defective IDO
c. Try deficiency Tryptophan –(IDO) niacin
1. iron, riboflavin, and pyridoxine deficiency
d. Symptoms
i. Dermatitis, Diarrhea, Dementia, Death
Term
15. refeeding a starved patient
Definition
a. 2 conditions to consider
i. Severely starved patients lack digestive enzymes
1. Can’t breakdown dietary CHO  diarrhea
ii. Intracellular phosphate stores depleted
1. Shift from CHO metabolism to gluconeogenesis/ ketogenesis  depletes phosphate stores
2. Reintroducing CHO starts glycolysis  consumes large amt of phosphates (soaks up phosphate from serum)
3. Hypophosphatemia ensues! Then death.
b. Always watch electrolytes, especially phosphate when refeeding a starved patient.
Term
16. obese patients experience starvation
Definition
a. Metabolic processes require phosphate, which is obtained from the diet.
No phosphate starvation
Term
17. exercise
Definition
a. First 10-20 minutes: muscle function driven by ATP/ creatine phosphate reserves
b. 20- 120 minutes: muscle function supported by mix of FA and glucose metabolism
i. 60 min: 50% depletion of liver glycogen
c. Over 120 min: glycogen stores exhausted – energy almost exclusively from FA beta oxidation
Term
18. Type 1 (juvenile or insulin dependent diabetes mellitus (IDDM))
Definition
i. Cause:
1. Autoimmune destruction of insulin producing, pancreatic beta cells
a. Possibly triggered by viral infection causing immune system to attack beta cells
b. Genetic factors
ii. Prevalence:
1. 10-20% of total cases of diabetes
iii. Treatment:
1. Exogenous insulin in correct amount
Term
19. Type 2 (adult onset or non-insulin dependent diabetes mellitus (NIDDM))
Definition
i. Cause:
1. Insulin resistant target tissues
a. Consequence of chronic hyperalimentation (overeating)
i. Overloads capacity to remove glucose from circulation
b. Insulin concentration usually very high
2. Central obesity & sedentary lifestyle
3. Genetic factors
ii. Prevalance:
1. 90% of total cases of diabetes
iii. Treatment:
1. Weight loss & exercise
2. Drug therapy
a. Stimulate insulin secretion
b. Sensitizing peripheral tissue to insulin
c. Reduce intestinal absorption of glucose
d. Repress gluconeogenesis (review of regulatory targets below)
Term
20. Gestational Diabetes
Definition
i. Cause:
1. Insulin sensitivity of mother is down-regulated (normal)
a. Allows fetus to compete for glucose
2. Problem: TOO MUCH DOWNREGULATION
a. Causes birth defects and fetal overgrowth
ii. Treatment:
1. Maternal glucose levels monitored closely during pregnancy
Term
21. Hyperglycemia
Definition
i. Typical of Type 2 diabetes
ii. High serum [glucose]  high osmotic pressure draws water from tissues  dehydration results
1. Excess water excreted by kidney  polyuria
2. Thirsty b/c body tries to rehydrate  polydipsia
3. Dehydration + hyperglycemia affect CNS  confusion & disorientation (non-ketotic hyperosmolar syndrome (NKHS) or hyperosmolar hyperglycemic state (HHS))
a. Extreme cases cause NKHS coma (NKHHC)
b. Treatment of NKHHC:
i. fluid administration and fluid replacement
ii. Serum potassium must be watched at all times!
1. Potassium lost during periods of fluid loss
2. Insulin forces potassium into cell, so serum potassium will drop after insulin admin
Term
22. Hyperlipidemia
Definition
i. Insulin insufficiency  hyperlipidemia (increased VLDLs, chylomicrons, & FFAs)
1. Lipoprotein lipase (LPL) is regulated by insulin
a. Insufficient insulin  LPL remains INACTIVE  lipids not released from VLDL or chylomicron  lipoproteins increase
ii. Insufficient insulin  hormone sensitive lipase (HSL) remains ACTIVE
1. Adipocytes continually release FAs into circulation  liver takes up FAs  integrates FAs into VLDL  further increased circulating VLDL
Term
23. Ketoacidosis
Definition
ii. Diabetic Ketoacidosis (DKA) – consequence of unrestrained lipolysis and ketone production
iii. Insulin represses ketone production by:
1. Insulin inhibits lipolysis by inhibiting HSL
2. Insulin inhibits transport of FAs into mitochondria
REVIEW: FA Transport into mitochondria
a. SHORT FFAs (up to 10 Cs) can cross mito membrane w/o help
b. MEDIUM-LONG FFAs (12 Cs and up) are regulated by a 3 step process
i. Coenzmye A activate FAs (requires ATP)
1. FA + CoA + ATP –[Acyl-CoA Synthetase] Acyl-CoA + AMP + PP
ii. Carnitine
1. CPT 1 (carnitine-palmitoyltransferase) in OUTER Mito membrane transfers acyl-group from CoA to Carnitine
a. Acyl-CoA + carnitine  acyl-carnitine + CoA
2. Translocase in inner mito membrane moves acyl-CoA into matrix
a. Acyl CoA –[translocase] into matrix
iii. Re-synthesis of acyl-CoA
1. CPT 2 in inner mito membrane transfers acyl group from carnitine back to CoA

iv. No insulin no inhibition of ketone synthesis  ketoacidosis
v. Patients present with hyperglycemia, nausea, vomiting, abdominal pain
vi. High serum [glucose]  dehydration (watch for potassium loss through kidney)
vii. Treatment:
1. Fluid replacement
2. Correction of hyperglycemia and acidosis
*Insulin admin lowers serum glucose AND potassium
Term
24. General Angiopathy
Definition
i. High serum [glucose]  damage walls of blood vessels
1. Large vessel damage  stroke and MI
2. Small vessel damage  cuts off blood supply to peripheral tissue  necrosis of:
a. Retina  blindness
b. Nephrons  kidney failure
Term
25. Acute Intermittent Porphyria (AIP)
Definition
i. Deficient PBG deaminase
ii. ALA & PBG accumulate in blood and urine (dark red)
iii. Symptoms
1. Confusion, sharp abdominal pain, death
Term
26. Porphyria Cutanea Tarda (PCT)
Definition
i. Deficient UPG decarboxylase
ii. Porphyrins accumulate – detected in urine
1. Pink fluorescence under UV light
iii. Symptoms
1. Photosensitivity – due to porphyrins absorbing UV light  creates O2 radicals in tissue
Term
27. Lead Poisoning
Definition
i. Inhibits PBG synthase & ferrocheletase
ii. ALA & other heme precursors accumulates
iii. Symptoms
1. Similar to the porphyrias
28. alcohol and certain drugs trigger porphyria attack
a. Alcohol/drugs induce cytochrome synthesis  creates demand for heme.
b. Patients that already suffer from porphyria  cause a buildup of synthesis intermediates, and trigger an acute porphyria attack.
Term
29. Prehepatic (hemolytic) Jaundice
Definition
i. Elevated RBC destruction  high serum [bilirubin]  exceed liver capacity for glucoronation and excretion
ii. High [INDIRECT BILIRUBIN]
iii. Examples
1. Neonatal physiological jaundice
2. Hemolytic diseases
Term
30. Hepatocellular Jaundice (Liver Disease)
Definition
i. Liver disease impairs function of glucoronation
ii. High [INDIRECT BILIRUBIN]
iii. Characteristics
1. Pale color feces & urine
2. Mostly unconjugated bilirubin in tissues and serum
3. ALT & AST in serum
iv. Common Causes
1. Acetaminophen poisoning
2. Hepatitis
Term
31. Cholestatic Jaundice (obstruction)
Definition
i. Obstructed biliary duct impairs excretion of conjugated bilirubin
ii. High [CONJUGATED BILIRUBIN]
iii. Characteristics
1. Pale color feces DARK urine
2. Alkaline phosphatase in serum
iv. Causes
1. Gallstones
2. Neoplasia
3. Cirrhosis
Term
i. Hyperuricemia
Definition
1. Reduced excretion (most common)
a. Renal insufficiency
b. Metabolic acidosis (competition b/t uric acid and organic acids for excretion)
2. Increased production
a. Increased nucleotide turnover (hemolytic disease, chemotherapy)
b. Diets rich in purine
3. Alcohol consumption both increases production & reduces excretion
a. Liver damage  rapid turnover of ATP & increase serum lactic acid
4. Hyperuricemia leads to gout and kidney stones
Term
b. Gout
Definition
i. Uric acid is relatively insoluble
ii. Exists as urate ion in serum
iii. Sodium urate crystals deposit in joints of extremities
iv. Symptoms
1. Pain
2. Joint swelling
v. Generally only one joint affected  MP joint of 1st toe
1. Other joints can be affected:
a. tarsal joints
b. ankles
c. knees
Term
c. Kidney Stones
Definition
i. High [uric acid]  deposition in kidney
Term
33. allopurinol
Definition
acts to reduce uric acid levels
a. Allopurinol  oxypurinol
i. Oxypurinol comp. inhibits xanthine oxidase
1. Xanthine –(xanthine oxidase)uric acids
Term
34. Orotic aciduria
Definition
a. Defect in UMP Synthase Orotic acid accumulation
b. Inability to synthesize pyrimidines
i. Megaloblastic anemia
ii. defects in cell immunity
c. Treatment
i. Pyrimidine supplementation
Term
35. hydroxyurea
Definition
block cell proliferation
a. Hydroxyurea Inhibits ribonucleotide reductase
i. Blocking ribonucleotide reductase  NO dNTP synthesis no cell proliferation
ii. Important cancer chemotherapy agent
Term
36. severe combined immunodeficiency (SCID)
Definition
a. Impacts B & T Cell function
b. Mutated adenosine deaminase
i. Adenosine—(adenosine deaminase) inosine
ii. Build-up of adenosine metabolites
1. Increased dATP  inhib ribonucleotide reductase
a. Blocks purine  pyrimidine  inadequate cell proliferation  inadequate immune responses
Term
37. 5-fluorouracil
Definition
a. 5-FU (a uracil analog w/ flourine)
i. Thymidilate synthase inhibitor
ii. 5-FU  FUMP  FUTP is incorporated into RNA
1. FUDP –(ribonucleotide reductase) FdUDP  FdUMP
a. FdUMP + N5, N10 methylene  covalently bind thymidylate synthase  IRREVERSIBLE INHIBITION of thymidylate synthase  decrease dTTP & increased dUTP & increase FdUMP
i. DNA strand breakage & cell death
Term
38. Lesch-Nyhan syndrome
Definition
a. Deficient HGPRTase
b. Symptoms
i. Hyperuricemia
ii. Kidney stones
iii. Intellectual disability
iv. Self destructive biting of fingers and lips
Term
salvage of purine bases
Definition
Hypoxanthine + PRPP  IMP + PPi

Guanine + PRPP  GMP + PPi

HGPRTase
1. Decrease de novo synthesis of purines by consuming PRPP
2. GMP inhibits amidophosphoribosyltransferase
(enzyme of purine synth committed step)
Term
39. antifungal agent
Definition
yet has low toxicity in the human body
a. 5-FC
i. Antifungal agent
ii. Fungi express cytosine deaminase
1. 5-FC –(cytosine deaminase) F5-U
a. FU (a uracil analog w/ flourine)
i. Thymidilate synthase inhibitor
1. 5-FU  FUMP  FUTP is incorporated into RNA
2. FUDP –(ribonucleotide reductase) FdUDP  FdUMP
3. FdUMP + N5, N10 methylene  covalently bind thymidylate synthase  IRREVERSIBLE INHIBITION of thymidylate synthase  decrease dTTP & increased dUTP & increase FdUMP
4. DNA strand breakage & cell death  death of FUNGI
iii. Human cells cannot deaminate cytosine so the drug has low toxicity
Term
40. Causes of elevated serum alkaline phosphatase (AP)
Definition
i. Liver disease
1. AP secreted by cells lining gall duct
2. Obstructive gall duct INCREASES serum AP
3. Also have high bilirubin
ii. Bone disease
1. AP secreted during bone remodeling
2. Increased bone remodeling INCREASES serum AP
Term
41. abnormal albumin concentrations
Definition
a. Albumin produces by liver  Binds hydrophobic stuff (steroid hormones, FAs, indirect bilirubin) and Ca2+
i. Maintains oncotic pressure
b. Low serum albumin
i. Manifests as edema b/c water osmotically drawn into tissue … not enough albumin in serum to pull water into circulation, so water goes where the proteins are pulling hardest, the tissue
ii. Caused by Liver Disease
Term
42. Causes of abnormal serum potassium
Definition
i. High K+
1. Decreased excretion
a. Renal insufficiency
ii. Low K+
1. Increased loss due to excretion by GI or kidneys
a. Diarrhea
b. Diuretics
Term
43. high serum BUN/creatinine levels
Definition
a. High Blood Urea Nitrogen (BUN)
i. If PRO intake and catabolism are normal, elevated BUN may indicate impaired renal excretion
b. High serum creatinine
Term
glomerular filtration (GFR)problem
Definition
44. Increased serum
Term
45. CRP level
Definition
a. CRP made by liver
b. Marker of acute response to injury
c. Useful for following healing process; sudden rise in CRP es no bueno
Term
46. myocardial infarctions
Definition
b. Myoglobin –
i. very high immediately after MI
ii. NOT heart muscle specific
c. Creatine Kinase (CK-MB)
i. Cardiac isozyme of creatine kinase (CK-MB)
ii. Detectable very early after MI
iii. Disappears quickly
d. AST
i. Released a little later than CK-MB
e. *Troponins (TnC)
i. Most sensitive marker of MI
ii. Detected very early
1. If 12 hrs after onset of chest pain there are no troponins  no MI
f. Lactate DH (LDH)
i. Cardiac isoform of lactate DH
ii. Released several days after MI
g. Onset of MI determined by ratio of serum enzymes
Term
47. diabetic patient
Definition
a. Urine analysis
i. Check for hyperglycemia
b. HbA1c  reflection of 120 day glycemic control
i. High HbA1c  poor glycemic control
c. C-Peptide  measure endogenous insulin production
i. Higher C-Peptide  higher insulin production
Term
48. kidney and liver function tests
Definition
a. Kidney Disease
i. High BUN & creatinine  renal failure
ii. Low urine osmolality renal failure
iii. Excretion of Na+ and K+ normalized to creatinine excretion
Term
49. Liver Function Test
Definition
i. Bilirubin
ii. ALT/AST
iii. Alkaline phosphatase
Term
50. reperfusion injury
Definition
a. Reperfusion – sudden reintroduction of oxygen to hypoxic tissue  burst of ROS that damage membranes, PROs, & DNA
i. Causes:
1. Reactive Oxygen Species (ROS)
2. Vascular injury
3. Alterations in Ca2+ handling
4. Altered myocyte metabolism
5. Inflammatory response
ii. Intervention ( though ineffective in clinical trials)
1. Antioxidant therapy (Vit E)
Term
51. iron overload
Definition
generates oxidative stress
a. Excessive iron generates HOˑ which damages hepatocytes & other tissues
IRON – bound to ferritin
O2 + Fe2+ O2- + Fe3+
H2O2 + Fe2+  HOˑ + HO- + Fe3+
b. Treatment
i. Bleeding patient  decreases iron & increases iron consumption during regeneration of Hb for RBCs
ii. Chelation of serum iron (bind it to something else)
Term
1. Clustered gene family
Definition
a. Gene family clustered at one ch’somal locus
b. Ex. B-globin gene family
i. Hydroxyurea
1. used to treat sickle cell anemia
2. stimulates expression of fetal copies of B-globin gene in adults  compensates for defective copy of gene in adult
Term
2. nalidixic acid & ciprofloxacin (antibiotic)
Definition
a. acts on Bacterial Topoisomerase II
i. manipulates 2 intact double helices at a time. Introduces transient double strand break in one double helix, then directs the other double strand through opening and relegates it at site of cut.
Term
3. doxorubicin (anticancer)
Definition
a. Acts on Human Topoisomerase II
i. manipulates 2 intact double helices at a time. Introduces transient double strand break in one double helix, then directs the other double strand through opening and relegates it at site of cut
Term
4. Azoospermic Male (Meiosis arrest)
Definition
1. No sperm in semen
2. No synaptonemal complex  Failure of sperm to complete meiosis I
 no mature sperm
Term
5. Xeroderma Pigmentosa (XP)
Definition
a. Cause:
i. Errors in nucleotide excision repair cause
1. errors in helicase, DNA polymerase, or DNA ligase
b. Effect
i. extreme sensitivity of skin to sunlight
ii. pigmentation changes
iii. skin cancer on areas exposed to sun
Term
6. Bloom syndrome
Definition
a. Proportional dwarfism, keel shaped face, photosensitivity, immunodeficiency, reduced fertility, predisposition to many malignancies
b. Mutation in BLM gene encoding for DNA helicase
i. Defective DNA replication
ii. Replication fork progression and processing of Okazaki fragment delayed
Term
7. HNPCC [Heritable Nonpolypsis Colorectal Cancer] (Lynch Syndrome)
Definition
a. Caused by defect in mismatch repair system
Term
8. Cytarabine (Cytosar-U or Tarabine PFS)
Definition
a. An analogue of cytidine that contains arabinose in place of ribose
b. Converted to cytarabine triphosphate inside cells
i. Competes for binding to DNA polymerases  blocks replication
ii. Treatment for leukemia
Term
9. Cyclophosphamide (Cytoxan or Neosar)
Definition
a. Is a pro-drug
i. Cyclophosphamide –[liver] phosphoramide mustard
ii. Phosphoramide mustard is a bifunctional alkylating agent
1. Forms DNA crosslinks  programmed cell death
b. Treatment for Hodgkins Lymphoma, lung, breast, and testicular cancer
Term
10. Doxorubicin (adriamycin)
Definition
a. Anthracycline antibiotic
b. Forms complex w/ DNA & topoisomerase II
i. Topoisomerase passes one double stranded segment of DNA through an enzyme mediated break in the double strand
ii. Relieves supercoiling
c. Doxorubicin prevents re-ligation of double strand break  programmed cell death
Term
11. toxin-α-amanitin functions
Definition
a. Death Cap Mushroom
i. Inhibits Pol II  blocks mRNA synthesis
ii. Symptoms
1. Initial: mild GI distress
2. 48 hours: massive liver failure
a. Essential liver PROs & their mRNAs degraded by normal processes cannot be replaced b/c of Pol II inhibition
iii. Treatment
1. Support
a. Gastric lavage (emptying)
b. Activated charcoal removes unabsorbed toxin & interrupts hepatic circulation of toxin
2. 20-40% fatality w/o Liver transplant
Term
12. Rifampicin
Definition
a. Found is streptomycetes in soil
b. Inhibit Pol II in BACTERIA, but not eukaryotic Pol II
c. Effective against Mycobacterium tuberculosis
Term
13. β-thalassemia
Definition
= reduced synth of β-chain of Hb
i. results in anemia
Cause
ii. Incorrect splicing of pre-mRNA
1. Β0 mutation destroys normal acceptor site at end of intron 2
a. Result  mRNA no longer codes for β-globin gene
2. β+ mutation that creates new acceptor site in intron 1
a. Result  mRNA no longer codes for β-globin gene
Term
14. Rubenstein-Taybi syndrome
Definition
a. Increase cAMP  increase PKA  phosphorylate CREB  binds CRE recruits CBP aka CREBBP  recruits EP300
i. CBP & EP300 function as HATs  acetylate histone  relax chromatin  TXN ON
b. Rubenstein-Taybi
i. Mutated CBP or EP300  NO TXN
Term
15. tamoxifen
Definition
a. Estrogen receptor is an activator of TXN
b. Some breast cancer cells are ER+, evidence that estrogen is responsible for aberrant cell growth during puberty
c. Tamoxifen is a comp. inhib of estrogen  inhibits tumor growth
Term
16. Antiobiotics
Definition
1. *Streptomycin binds small subunit  inhib initiation & cause mistranslation
2. *Neomycin/gentamycin binds ribosomes and cause mistranslation
3. *Tetracycline blocks A-site & prevents tRNA binding
4. Chloramphenicol prevents peptide bond formation b/t 1st & 2nd aa(Step 3 Elong)
Term
17. Toxins
Definition
1. Ricin glycosidase that removes adenine bases from rRNA in large subunit
2. Diptheria toxin inactivates EF2 by ADP ribosylation
EF2 + NAD Diptheria Toxin ADP-ribosyl EF2 + nicotinamide
Term
18. Charcot Marie Tooth Disease
Definition
a. Mutated Heat Shock PROs
b. Chaperones repair PRO damage from heat & other stresses that unfold PROs
Term
19. congenital disorders of glycosylation (CDGs)
Definition
a. Impair N-linked glycosylation of PROs
b. Failure to glycosylate PRO can’t secrete PRO and impairs EC enzymatic reactions
c. Clinical Presentation
i. PRO losing enteropathy
ii. Hypoglycemia
iii. Hypotonia
Term
20. Lysosomal Sulfatase deficiency
Definition
GAGs accumulate in lysosome
Term
21. Scurvy, Ehlers Danlos, Osteogenesis Imperfectica
Definition
a. Malfunction
i. Proline hydroxylation  collagen
Term
22. Cystic Fibrosis
Definition
a. Deletion of CFTR1 gene
b. Interferes w/ PRO folding & glycosylation
c. Incorrect folding of CFTR protein  cytosol for degradation
Term
23. I-cell disease
Definition
a. Transfer of Phosphate to mannose impaired
b. Lysosomal PRO don’t reach their compartment in the lysosome  accumulation of PROs in lysosome
i. In fibroblast: detect dense inclusion bodies of non-fxn lysosome
ii. In serum: detect lysosomal PROs that didn’t reach destination
Term
24. Deafness-dystonia Syndrome
Definition
a. Mutation of TIM
b. Prevent assembly of fully fxn mito
Term
25. Burkitt’s Lymphoma
Definition
i. Inappropriate MYC activation
ii. TRANSLOCATION OF CH’SOME 8 & 14
1. Moves MYC from ch’some 8 (normal) to ch’some 14 (mutation)
MYC on ch’some 8 Normal  regulated

MYC on ch’some 14 Abnormal  unregulated  under control of immunoglobin (Ig) heavy chain promoters

B-cells continually produce Ig, now overproduce MYC  uncontrolled cell proliferation
Term
APC
Definition
Colon carcinoma Familial adenomatous polyposis (FAP)
Regulate β-catenin (cell-cell signaling)
Term
P53
Definition
Many types Li-Fraumeni Syndrome
GF signal pathway
Regulates RAS activity
Term
P16
Definition
melanoma Familial Melanoma
Inhibit CDK4 & CDK6
Term
RB
Definition
retinoblastoma Familial Retinoblastoma Regulate G1 restriction point of cell cycle
Term
MSH2, MLH1, PMS1, PMS2
Definition
MSH2, MLH1, PMS1, PMS2
Term
BRCA1, BRCA2
Definition
Breast Cancer Familial breast cancer DNA double strand break repair
Term
XPA, XPB, XPD
Definition
Skin Xerodoma Pigmentosa Nucleotide excision repair
Term
ATM
Definition
Leukemias & lymphomas Ataxia telangiectasia DNA double strand break signaling
Term
Li-Fraumeni Syndrome
Definition
Defective p53
Breast, colon cancer, soft tissue, brain, leukemia, adrenocortical cancers
Defective p53 binds normal p53  non-functional tetramer
P53Unable to stop cell cycle for DNA repair
Term
Cervical Cancer
(HPV)
Definition
p53Unable to stop cell cycle for DNA repair
p21  Unable to inhibit cell proliferation
RB Unable to inhibit cell proliferationE6 inhibits p53
E7 inhibits p53, p21, & RB
Cervical cancer
HPV produces E6 & E7
Term
Heritable Rb
Definition
Child inherits mutant RB1 gene

Germline mutation  RB1 mut in ALL tissues

Somatic mutation in retinal cell 
no functional Rb PRO produced

Both eyes affected; younger pts
Term
FAP
(Familial Adenomatous Polyposis
Definition
ONE Mutated APC gene (Adenomonatous Polyposis Coli)

*NOT Anaphase Promoting Complex (also apoptosis)

Defective cell division & aneuploidy

Mut APC…β-catenin unregulated  Wnt binds β-catenin  complex into nucleus & activates TXN of myc & cyclin D (G1-CDK4/6)  cell proliferation
No Wnt signal….APC gene  APC tumor suppressor  tumor suppressor binds β-catenin  degradation by proteasome

Wnt signal….Wnt binds β-catenin  activate Myc & Cyclin D in nucleus  cell proliferation
Term
HNPCC
(Hereditary Non-Polyposis Colorectal Cancer)
(Lynch Sundrome)
Definition
Mutated MLH1 or MLH2
Defective mismatch repair
Microsatellite instability

(microsatellites are short tandem repeats throughout genome…prone to replication errors that are normally repaired by mismatch repair enzymes )
Term
Chronic Myeloid Leukemia
Definition
Philadelphia Ch’some
Reciprocal translocation b/t Ch9 & Ch22

Ch9 & Ch22 translocation BCR-ABL Fusion

ABL  Tyr Kinase (normally reg. apop & signaling pathways)

BCR-ABL  ABL constantly activates BCR  cell proliferation

Imatinib mesylate (Gleevec)  inhib BCR-ABL
Term
Non-small cell lung cancer
Definition
Mutated EGF-R


Gefinitib  Tyr Kinase Inhibitor
Term
Breast Cancer
Definition
Overexpress HER2-R (ErbB2)


Herceptin (monoclonal antibiotic)  accelerate HER2-R internalization
Term
Non-hodgkins Lymphoma
Definition
Rituximab (monoclonal antibody) flag CD20 of B-cell for destruction
Term
32. Imatinib (Gleevec)
Definition
a. Tyrosine Kinase inhibitor
b. Inhibits BCR-ABL in CML
Term
33. Gefitinib
Definition
a. Tyr Kinase Inhibitor
b. Prevents EGF phosphorylation  stops txn
Term
34. Herceptin
Definition
a. (monoclonal antibiotic)  accelerate HER2-R internalization
b. Reduces available
i. Reduces availability of receptor for dimerization  activate Tyr Kinase domains instead
Term
35. Rituximab
Definition
monoclonal antibiotic)  accelerate HER2-R internalization
b. Reduces available
i. Reduces availability of receptor for dimerization  activate Tyr Kinase domains instead
Term
36. 5-azacytidine
Definition
a. Reverses DNA methylation and reactivate silenced genes
Term
1. PKU
Definition
a. Mode of Inheritance
i. AR
b. Clinical features of PKU.
i. Phe –(Phe Hydroxylase / DHBtn Reductase) Tyr
[THBtn + O2  DHBtn + NADH  THBtn +02  DHBtn + H20]
ii. Phe Hydroxylase primarily located in LIVER
iii. Excess Phe converted to phenylpyruvate (for disposal)
iv. Urine is high in phenylpyruvate
v. enzyme defects that cause PKU
1. Phe Hydroxylase
2. DHBtn Reductase
c. Treatment
i. Low Phe diet supplemented with Tyr
ii. Patients with PKUshould avoid aspartame (Nutrasweet)
a. Aspartame  Asp + Phe + methanol
b. Patients with PKU accumulate phenylpyruvate which causes brain damage
Term
Cystic Fibrosis
Definition
d. Mode of Inheritance
i. AR
a. Clinical Features of Cystic Fibrosis
i. Incorrectly folded PROs  cytoplasm for degradation
1. Deletion of CFTR1 gene
2. Interferes w/ PRO folding & glycosylation
3. Incorrect folding of CFTR protein  cytosol for degradation
4. Loss of CFTR function
a. Cl- not transported, so Na+ & H2O won’t follow
b. Symptoms
i. accumulation of Thick mucus in lungs & GI tract
ii. respiratory infections
iii. pancreatic malfunction
iv. Congenital Absence of the Vas Deferens  infertility in males
c. Diagnosis
i. chloride sweat test Sweat of patients is abnormally salty; test electric conductance of skin
ii. Allele Heterogenity (genotype/phenotype correlation) Pt might have different mutations on each mutant allele
1. Pancreatic Sufficient CFTR: Some patients have enough residual CFTR activity for normal digestion
2. Pancreatic Insufficient: Require pancreatic enzyme supplementation
iii. Modifier Genes
1. PROs don’t act alone, so activity of other PROs has impact on severity of CFTR mutations
iv. carriers may be less susceptible to cholera
b. Treatment of Cystic Fibrosis
i. Chest percussion to loosen mucus
ii. Bronchodilators to help clear mucus
iii. Antibiotics to prevent infection
iv. Admin pancreatic enzymes
v. Last Resort: Lung Transplant
Term
Neurofibromatosis Type I (NF1)
Definition
i. Mode of Inheritance
1. AD
2. Complete penetrance
3. Variable expressivity – less than half of newborns show symptoms, b/c it’s an age dependent disease; don’t forget that genes have modifying affect in each other, thus affecting the expressivity of mutant genes
4. Pleiotropic: affects skin, iris, CNS
ii. Clinical Features
1. Mutated NF1 gene on ch’some 17
2. NF1 expressed in cytosol of neurons, schwann clls, oligodendrocytes, astrocytes, & leukocytes
3. Diagnosis
a. 6+ café au lait macules
b. Lisch nodules in iris
c. 2+ neurofibromas
d. 1+ plexiform neurofibromas (1 usually enough for Dx)
Term
3. Huntington Disease
Definition
i. Mode of Inheritance
1. AD
2. CAG Triplet Expansion: insertion of an aa into the reading frame
a. Can occur during mitosis or meiosis
3. Complete penetrance
4. Demonstrates Anticipation
ii. Clinical Features
1. Multiple neurological disorders around age 40
a. Dementia
b. Uncontrolled movement of limbs
2. Late onset results in people having kids before they know they are carriers
3. Gain of function mutation
iii. Anticipation
1. CAG triplet expansion  polyglutamine residues in PRO
a. Normal: 9-35 CAG repeats
b. HD disease: when exceed 40 CAG repeats
c. Premutation: 35 repeat  higher chance of producing gametes w/ HD
d. See pg 563
i. Age of onset depends directly on #CAG repeats
2. Asymptomatic individual has 50% chance of passing on premutation
3. Chance of increasing size of expansion during mitosis and meiosis  increase chance offspring inherit more aggressive mutation (early onset w/ stronger symptoms)
Term
4. Achondroplasia
Definition
i. Mode of Inheritance
1. AD
2. New mutation in FGFR3 (fibroblast growth factor)
a. Mutation hotspots
ii. Clinical Features
1. FGFR3 is a Tyr Kinase receptor
a. Normally: FGF binds FGFR3  inhibits chondrocyte proliferation  inhib bone growth
b. Mut FGFR3: constitutively ACTIVE  inhib bone growth
2. Fitness = 0.2 (20% fertility)
3. Mutation Hotspot
a. Area in ch’some where mutations occur frequently
b. Typical hotspot:
i. CG dinucleotide repeat
ii. C often methylated  methylcytosine
iii. Spontaneous deamination of methylcytosine yields T
iv. C for T (or G for A) substitutions occur at rate 25x greater than any other nucleotide exchange
c. Correlation b/t new mutations and paternal age
i. More mutations in older sperm than younger sperm
ii.
Term
5. Osteogenesis Imperfectica Type I
Definition
i. Mode of Inheritance
1. AD
2. Dominant negative effect
ii. Clinical Features
1. Null mutation of Type I collagen genes
a. Diagnosis is similar to Ehlers Danlos b/c genetics is diagnosis driven
2. Skeletal deformity
3. Predisposition to fractures
Term
6. Familial Hypercholestremia
Definition
i. Mode of Inheritance
1. AD
2. Gene Dosage Effect
a. Heterozygotes have 2x elevated serum cholesterol
b. Homozygotes have 4x elevated serum cholesterol
3. Mutated LDL receptor
ii. Clinical Features
LDL receptor = glycoprotein spanning plasma membrane
1. C-terminal – inside cell
2. N-terminal – outside cell
a. Recognizes
i. ApoB
ii. ApoE of LDL & VLDL
b. Binding leads to endocytosis of receptor and uptake of LDL & VLDL
Term
7. Duchenne Muscular Dystrophy
Definition
i. Mode of Inheritance
1. XR
2. Dytrophin is a large target for mutation
3. 2x mutation rate of other diseases due to its size
ii. Clinical Features
4. Defective dystrophin gene
5. Dystrophin links cytoskeleton to ECM
a. Dystrophin interacts w/ actin, syntrophins, & dystobrevin
b. Also binds β-dystroglycan (large transmembrane complex) interacts w/ α-dystroglycan on EC plasma membrane
c. α-dystroglycan links cell to α-laminin of ECM
d. see appendix 20d…..Draw pg 569
6. Lack of dystrophin muscles accumulate damage & disintegrate
Term
8. Becker Muscular Dystrophy
Definition
iii. ¬Mode of Inheritance
1. XR
2. Same as DMD
iv. Clinical features
3. Mutation does not completely abolish dystrophin function
Term
9. Hypophosphatemic Rickets
Definition
i. Mode of Inheritance
1. XD
ii. Clinical Features
1. Mut. PHEX gene
a. Low phosphate levels
b. Stunted bone growth
c. Short stature
d. Dental abnormalities
e. Low renal phosphate reabsorption
Term
10. Incontinentia Pigmenti
Definition
i. Mode of Inheritance
1. XD
2. Lethal in males (only 1 X Ch’some) – won’t see pedigree w/ males
ii. Clinical Features
1. Mutated IKK-gamma gene (NEMO)
2. skin lesions evolve through characteristic stages:
a. blistering (from birth to about four months of age),
b. a wart-like rash (for several months),
c. swirling macular hyperpigmentation (from about six months of age into adulthood), followed by
d. linear hypopigmentation.
3. Alopecia
4. hypodontia
5. abnormal tooth shape
6. hyperpigmentation
7. microencephaly
Term
Leber’s Hereditary Optical Neuropathy (LHON)
Definition
i. Mode of Inheritance
8. Mito
ii. Clinical Features
9. Mutated ND1 gene
10. ND1 is part of complex I of ETS
11. Rapid deterioration of optic nerve  blindness
Term
Achondroplasia
Definition
AD Defect in bone growth New mutations
Fitness
Dominant negative allele
Mutation hotspot
Term
Becker Muscular Dystrophy
Definition
XR Lack of dystrophin muscles accumulate damage & disintegrate
Same as DMD except Mutation does not completely abolish dystrophin function
Term
Cystic Fibrosis
Definition
AR Defective Cl- channel Allele heterogeneity
Modifier loci
Term
Duchenne Muscular Dystrophy
Definition
XR Defect in distrophin New mutations
Large target
Term
Ehlers Danlos Syndrome
Definition
AR & AD Collagen disorder
Term
Familial Hypercholesterolemia
Definition
AD Defective LDL receptor Allele heterogenity
Term
F-1,6-BP DH deficiency
Definition
AR Fasting hypoglycemia
Term
Glycogen Storage Disorders
Definition
AR Hypoglycemia
Accumulation of glycogen
Term
G-6-P DH deficiency
Definition
XR Sensitivity to H2O2 generating agents & fava beans
Term
Huntington Disease
Definition
AD Neurological disorders New mutation
Triplet expansion
Anticipation
Term
Hypophosphatemic Rickets
Definition
XD Mut. PHEX gene
Low phosphate levels
Stunted bone growth
Short stature
Dental abnormalities
Low renal phosphate
reabsorption
Term
Incontinentia Pigmenti
Definition
XD Skin Rashes
Alopecia
hypodontia
abnormal tooth shape
hyperpigmentation
microencephaly
Term
Leber’s Hereditary Optical Neuropathy
Definition
Mito Defect on mito. DNA Heteroplasmy
Term
Neurofibromatosis Type 1
Definition
AD Multiple tumors New mutations
Variable expressivity
Pleiotropy
Term
Osteogenesis Imperfectica Type I
Definition
AD Defective Type I collagen Dominant negative allele
Allele heterogeneity
Term
PKU
Definition
AR Tyr metabolism Newborn screening
Term
Retinoblastoma
Definition
AD Tumor on the retina Rb regulates G1 restriction point of cell cycle

2 Hit model
1. Germline RB1 gene mutation
2. somatic RB1 mutation in retinal cell
Term
Sickle Cell Anemia
Definition
AR
Hemolysis Hemoglobinopathy
1. Substitution of Glu for Val in beta chain creates STICKY HYDROPHOBIC PATCH
2. In R-form patch is shielded
3. In T-form patch exposed hydrophobic effect causes T- form to polymerize into fibers that distort RBC

Treatment:
Hydroxyurea
1. stimulates expression of fetal copies of B-globin gene in adults compensates for defective copy of gene in adult
Term
Sucrase-Isomaltase Deficiency
Definition
AR Sucrose/glucose polymer intolerance Sucrose  Glucose + fructose

Disaccharides not cleaved cannot be taken up by the intestines  osmotically active so influx of H2O into intestine  diarrhea
Term
Cri-du-chat Syndrome
Definition
46 XY Del(5p)
Symptoms:
Distinct cry
Distinct facial appearance
Microencephaly
Hypertelorism (eyes far apart)
Epicanthal folds
Low set ears
Microagnathia
Mental retardation
Heart defects
Term
Di George Syndrome
Definition
Neural crest migration anomaly
Del 22q11.2
Symptoms:
Structural or fxn defects of thymus
Heart defects (CGHF)
Reduced parathyroid fxn
Secondary hypocalcemia
Term
Velocardiofacial syndrome
Definition
Symptoms:
Palatal abnormalities
Heart malformations
Facial characterizations
Narrow nasal root
Smooth philtrum
Developmental delays
Learning disability
Thymus malfunction
Term
Triploidy/ Tetraploidy
Definition
69XXX / 92XXXX
Cause:
fert by 2 sperm/ fert by 3 sperm
Term
Trisomy 21
Definition
Down syndrome
Cause: non-disjunction of ch 21 during anaphase
Term
Trisomy 18
Definition
Edward syndrome
Cause: non-disjunction of ch 18 during anaphase
Term
Turner Syndrome
Definition
45 X female
Term
Klinefelter Syndrome
Definition
47 XXY male
Term
XYY male
Definition
47 XYY
Term
MBPs
Definition
a. Repress transcription
b. HDACs remove acetyl from histones  chromatin condensation
c. Histone modification may be trigger for de novo methylation
d. Rett Syndrome
i. Defective MBPs
1. MBPs bind 5’ methylcytosine  repress txn
Term
14. Prader-Willi Syndrome
Definition
i. Causes
1. Del 15q11-q13 on Paternal Ch 15 snoRNA region (maternal normally silences)
2. maternal disomy  2 Methylated maternal snoRNA on Ch 15
a. BOTH result in Lack of expression of snoRNAs
ii. Symptoms
1. Obesity
2. Excessive food seeking
3. Hypogonadism
4. Mental retardation
Term
15. Angelman Syndrome
Definition
i. Causes
1. Del 15q11-q13 on Maternal Ch 15 UBE3A region (paternal normally silenced)
2. Paternal disomy  2 methylated paternal UBE3A on Ch 15
a. BOTH Lack of ubiquitin ligase (UBE3A) in brain
ii. Symptoms
1. Unusual face & movement
2. Seizures
3. Gait disorders
Term
16. Beckwith-Wiedemann Syndrome (BWS)
Definition
a. Paternal disomy Ch 11
b. Cause
i. Loss of methylation ( expression) of the same region of the maternal Ch11
c. Result
i. Overexpression of IC1 gene overabundance of IGF2 (insulin like growth factor)
d. Affect
i. Kidney
ii. Adrenal
iii. Liver problems
Term
17. 5’ azacytidine
Definition
DNMT Inhibitor
i. Causes hypomethylation of genome
ii. Correct cancer caused by hypermethylation (of tumor suppressors)
Term
18. HDAC inhibitors
Definition
promote histone hyperacetylation (expression) and gene re-expression (acetylates oncogenes to restore normal function
Term
20. Sporadic (mulitafactorial)
Definition
a. Cleft lip, isolated anomaly
b. Low RR (recurrence risk)
Term
21. Oligohydramnios
Definition
a. Defective Robin Sequence is cause of cleft lip due to extrinsic constraint on embryo interfering with growth
b. Low RR
c. Small, receding jaw
Term
22. Treacher-Collins Syndrome (TDS)
Definition
a. AD
b. High risk of complications
c. RR= 50%
d. Characteristics
i. Small jaw
ii. Down-slanting palpebral fissures
iii. Malar hypoplasia
Term
23. Aniridia type II
Definition
a. Mut. PAX6
i. Severity varies but can include
1. absence of eyes
2. craniofacial defects
3. CNS deformities
b. PAX6 is ‘master control’ gene assoc w/ devel of sensory organs
Term
24. VACTERL (mesoderm defect) Wk 4 devel
Definition
a. Vertebral
b. Anal atresia
c. Cardiac
d. Tracheo-esophageal fistula
e. Renal
f. Radial limb defects
Term
26. Smith-Lemli-Optiz Syndrome (SLOS)
Definition
i. AR
ii. Defective post-translational modification of SHH (inadequate cholesterol synth)
iii. Multiple severe congenital malformation
Term
27. Polycystic Kidney Disease
Definition
a. Mut. PKD1 or PKD2
i. Unable to sense fluid stream  proliferation not stopped  no cell polarization  polycystic kidney disease
Term
28. Lissencephaly (smooth brain)
Definition
a. Mut. LIS1 (PAFAHB1)
i. Interferes w/ orderly migration
ii. Smooth, thickened cortex lacking defined cell layers
Term
Hermaphrodites
Definition
Patient has testes & ovaries
Term
Male Pseudohermaphrodites
Definition
Failure to develop male genitalia
Causes

Defective testes development during embryogenesis

Problem w/ androgen synth by testes (5-α-reductase)

Deficient androgen receptor production

androgen insensitivity


draw pg 640
Term
Female Pseudohermaphrodites
Definition
Normal ovaries
Ambiguous or male genitalia
Causes

Congenital Adrenal Hyperplasia (CAH)
Def 21-hydroxylase
Involved in cortisol synth

Draw pg 640
Term
29. Pyloric Stenosis
Definition
i. Threshold of liability and Recurrence Risk
1. Males 1/200  males need less contributing alleles to be affected
a. Threshold of liability lower for males
b. Recurrence risk lower for males
2. Females 1/1000  higher threshold, so must have more contributing alleles to manifest disease than male  females have higher risk of (RR) have affected siblings, ESPECIALLY a brother.
a. Threshold of liability higher for females
b. Recurrence Risk higher for females
Term
30. Developmental Hip Dysplasia (DDH)
Definition
i. Threshold of liability and recurrence risk
1. 1/1000 births
2. More common in females ~ 5-9 female for every 1 male
a. Threshold of liability is lower for females
b. Recurrence Risk higher if 1st affected child is male
Term
31. Diginic Retinitis Pigmentosa
Definition
i. Two factors
ii. Retinitis Pigmentosa 7 (Slow Onset)
1. Mut PRPH2 & Mut ROM1
2. Manifests as 2 heterozygous mutations, one in each gene
a. Note: AD in PRPH2 causes disease, but not ROM1
Term
32. Type 2 Diabetes
Definition
i. Many factors
ii. Risk Factors
1. Older
2. Obese
3. Family history
4. History of gestational diabetes
5. Impaired glucose tolerance
6. Sedentary
7. Higher risk if African American, Hispanic, Native American, Pacific or Asian American
iii. 38 susceptible loci to T2D
1. Important bc patients in the future will bring in print outs from Direct To Consumer Genetics Companies wondering what it all means
iv. 26M (8.3%) in US have T2D
v. 19M diagnosed
vi. 7M undiagnosed
Term
1. Isolated clubfoot
Definition
a. Unknown etiology
i. 12 year study Honein et al., 2000. Am. J Epidem. 152(7), 658-665
1. Parents w/ family history of clubfoot 6 times more likely to have affected child than parents w/o affected relatives
2. In families w/ history of clubfoot, maternal smoking increases risk of child having clubfoot 40%
3. Both risk factors combined  20 fold elevated risk
4. Conclusion
a. Clubfoot results from both environmental and genetic factors
b. Risk is higher when both factors are present than one alone
c. Must be an interaction b/t environmental and genetic factors
Term
34. Myotonic Dystrophy
Definition
i. AD
ii. Prenatal Screening
1. Amniocentesis & chorionic villus sampling
2. Southern Blotting & PCR
a. CGT repeat in DM gene
iii. Symptoms
1. Muscle atrophy
2. Cataracts
3. Cardiac arrhythmias
4. Infertility
5. Endocrine disorders
6. Characteristic facial appearance
Term
35. Warfarin
Definition
i. Inhibits vit K & vit K epoxide reductases
1. Polymorphism in detoxifying gene P450 PRO  slow metabolism of warfarin  higher sensitivity
2. Mut VKORC1 (vit K epoxide reductase)  higher tolerance
Term
36. Cystic fibrosis
Definition
a. Gold standard: Direct sequencing (microarray, PCR)
b. Most common CFTR mutation
i. ΔF508 (66%)
ii. Microarray assay (faster) or PCR (slower)
1. To detect known mutations
2. There is a list of top 10 mutations of CFTR
Term
37. Duchenne Muscular Dystrophy (DMD)
Definition
a. Mut dystrophin gene (largest gene in genome)
b. Large insertions and deletions of DMD
i. Southern Blotting or quantitative PCR
1. Best way to detect insertions and deletions
ii. No top 10 list
c. BMD
Term
38. Monoclonal and Polyclonal antibody production
Definition
a. Point mutation in DMD
b. Antibodies produced by B-lymphocytes in response to antigen
i. Each B-cell produces one type of antibody
ii. Antibodies bind the epitope (domain) of antigenic agent
iii. Polyclonal antibodies obtained by injecting animal w/ antigen
1. Immune system produces different antibodies against each epitope of the antigen
2. Collect blood
3. Antibodies in serum
Term
39. Monoclonal antibodies
Definition
a. B-lymphocytes produce antibodies against epitopes of antigen
b. Collect B-lymphocyte fraction from spleen and fuse w/ myeloma cell
c. Hybridoma cells produce antibodies
d. Select and grow hybrid cells making desired antibody
Term
Retrovirus
Definition
Tumors and AIDS Stable (random insertion into genome)
Term
Adenovirus
Definition
Cold, conjunctivitis, gastroenteritis No integration. Expression lost in 3-4 weeks
Term
Adeno-associated virus
Definition
No known disease Stable
Term
Herpes Simplex Virus (HSV-1)
Definition
Mouth Ulcers, genital warts, encephalitis
Stable
Maintained outside ch’some
Term
Baculovirus
Definition
None in animals Unstable
Term
41. Severe Combined Immunodeficiency Syndrome (SCIDS)
Definition
1. Absent adenosine deaminase (ADA)
No ADA Deoxyadenosine accumulates  converted to dATP High dATP levels TOXIC to rapidly dividing cells loss of lymphocytes
2. dATP inhibits ribonucleotide reductase (required for ribonucleotide triphosphate synthesis)

3. Treatment procedure
a. T-cells (B-lymphocytes) isolated from patient
b. Retrovirus transfers ADA gene into cells
c. Cells are selected and grown in culture
d. Re-implant into patient
Term
42. In vivo
Definition
i. Treat cells directly in patient
ii. Works best on epithelial cells
iii. Cystic Fibrosis
1. Mut CFTR gene
2. Treatment
a. Deliver functional copy of CFTR gene into lung epithelial cells
b. Uses adenovirus vector
Term
43. Explain the basis for RNA interference (RNAi)
Definition
a. RNAi  shut down expression of undesirable genes
i. Viral genes
ii. Oncogenes
iii. Dominant mutant genes
b. Basis for treatment: Double stranded RNA molecules initiate destruction of certain mRNA molecules
Double stranded RNA (dsRNA) enzyme complex (DICER)  small interfering RNA (siRNA)  loaded onto RNA Induced Silencing Complex (RISC)  catalyzes cleavage of mRNA w/ sequence homologous to siRNA
Term
44. Herceptin
Definition
a. (monoclonal antibiotic)  accelerate HER2-R (ErBB2) internalization
b. Reduces availability of EGF receptor ERBB2 (HER2) for dimerization  activate Tyr Kinase domains instead
c. INHIBITS CELL PROLIFERATION
Term
45. Leber Congenital Amaurosis (LCA)
Definition
a. AR
b. Multifactorial disorder
c. Mut RPE65 gene
i. Cant generate retinal pigment for light detection
d. Severe retinal dystrophy
i. Nystagmus
ii. Poor vision
iii. Poor pupillary response
iv. Franschettis oculo-digital sign (eye poking/ pressing & rubbing)
e. Treatment
i. In vivo injection of Adenovirus vector w/ functional RPE65 gene sub-retinally
ii. Gene expression takes place  enzyme restored
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