Shared Flashcard Set

Details

Biochem FA and TAG Metabolism
KYCOM Block 3
84
Biochemistry
Graduate
11/01/2012

Additional Biochemistry Flashcards

 


 

Cards

Term
where and when are free FA most concentrated
Definition
plasma during fasting
Term
what transports free FA
Definition
serum albumin
Term
where do free FA come from
Definition
TAG in adipose or circulating lipoproteins
Term
where can free FA be consumed
Definition
most tissues
Term
where are free FA in low concentrations
Definition
tissues
Term
what are the functions of free fatty acids
Definition
membrane lipids (phospholipids, glycolipids), stored in adipose, major energy reseve
Term
what form at 90% of fatty acids in
Definition
feww
Term
what part of a fatty acid is hydrophobic
Definition
carbon chain
Term
what part of a fatty acid is hydrophillic, why
Definition
carboxyl group, at physological pH it is COO-
Term
due to the carbon end and the COO- end of fatty acids the molecule is considered to be...
Definition
amphipatic
Term
when the fatty acid is longer what does this do to the solubility
Definition
more hydrophobic, must be carried with a protein for transport, decreasing fluidity
Term
what does it mean if a fatty acid is saturated
Definition
no double bonds
Term
what does it mean if a fatty acid is unsaturated
Definition
it has one or more double bonds
Term
what conformation and pattern are double bonds in an unsaturated fatty acid
Definition
cis spaced every # carbons
Term
what do double bonds do to the physical properities of the fatty acid
Definition
reduce Tm and increase fluidity
Term
when naming what carbon do you begin numbering with
Definition
the carbonyl carbon
Term
how do you name a fatty acid
Definition
number of carbons : number of double bonds (location of double bonds)
Term
where is the alpha carbon located
Definition
next to the carbonyl, carbon 2
Term
where is the beta carbon located
Definition
carbon 3
Term
where is the gamma carbon located
Definition
carbon 4
Term
where is the omega carbon located
Definition
terminal methyl
Term
what is an alternativie way of naming fatty acids
Definition
name from the omega carbon instead of carbonyl
Term
what does it mean if a fatty acid is essential
Definition
we cannot syntheaize it
Term
what are the essential fatty acids
Definition
alpha-linolenic acid, linoleic acid, arachidonic acid
Term
what is the precursor for omega 3 fatty acid
Definition
alpha0linolenic acid
Term
what is the function of omega 3 fatty acid
Definition
growth and development
Term
what is the precursor for omega 6 fatty acid
Definition
linoleic acid
Term
what is the function of omega 6 fatty acid
Definition
prostaglandin synthesis
Term
what is the largest source of fatty acids in people
Definition
dietary
Term
what is the function o f arachadonic acid
Definition
becomes essential if linoleic acid is deficient in the diet
Term
what happens to excess dietary protein and carbs
Definition
turned into fatty acids
Term
where are the common places of de novo synthesis
Definition
liver and lactating mammary glands, some in adipose
Term
where are fatty acids made
Definition
cytoplasm
Term
what is the carbon source for fatty acid production
Definition
cytosolic acetyl CoA
Term
where does energy for fatty acid production come from
Definition
ATP
Term
where does reduction power for fatty acids production come from
Definition
NADPH
Term
how does the mitochondria make acetyl CoA
Definition
oxidizing pyruvate, beta-oxidation of long cahin CoA, catabolism of ketone bodies and some amino acids
Term
what causes FA to not be stored during FA synthesis
Definition
isocitrate dehydrogenase is inhibited by high ATP levels
Term
what is the first reaction in FA synthesis
Definition
citrate synthase turns acetyl CoA and OAA into citrate
Term
why is acetyl CoA turned into citrate in FA synthesis
Definition
because acetyl CoA cannot get through the mitochondrial membrane
Term
what happens to citrate after it crosses the membrane in fatty acid synthesis
Definition
ATP-citrate lyase cleaves it into acetyl-CoA and OAA
Term
after citrate gets turned into acetyl CoA what happens to it
Definition
ATP citrate lyase cleaves citrate into carboxylate acetyl using CO2 and ATP
Term
what causes short term activation of acetyl CoA carboxylase
Definition
citrate
Term
what causes short term deactivation of acetyl CoA carboxylase
Definition
long chain FA, AMP activated protein kinase
Term
what activates AMP activated protein kinase
Definition
AMP
Term
what inhibits AMP activated protein kinase
Definition
glucagon and epinepherine
Term
what is AMP activated protein kinase dependent on
Definition
cAMP
Term
what stimulates acetyl CoA carboxylase long term
Definition
prolonged high calorie or carbohydrate diet
Term
wat inhibits acetyl CoA carboxylase long term
Definition
low calorie or carb diet
Term
what is the function of turning acetyl CoA into caeboxylate acetyl
Definition
provides energy or carbon to carbon condensations in elongation of the FA with the help of decarboxylation
Term
what is the rate limiting step of fatty acid synthesis
Definition
acetyl CoA carboxylase
Term
how many things does fatty acid synthase do
Definition
7
Term
what are the domains of fatty acid synthase
Definition
domain for binding 4-phosphopantetheine, acyl carrier protein domain
Term
what occurs at the domain for binding 4-phosphopantetheine
Definition
it functions as an acyl carrier protein with acyl units on its terminal thiol group during fatty acid synthesis
Term
what happens at the acyl carrier protein domain
Definition
acetyl is transferred to it to CYS, malonate is transferred from malonyl CoA to it, acetyl CoA carboxylase adds CO2 to it
Term
what drives reaction between acyl CIS and malonyl CoA on acyl carrier protein
Definition
CO2 added by acetyl CoA carboxylase
Term
what remains attached to acyl carrier protein domain, what is produced
Definition
4 carbon product is attached, 3-ketoacyl is made
Term
what happens for 3-ketoacyl
Definition
converted to saturated acyl by two reductions using NADPH and dehydration making alcohol
Term
once an alcohol is made in fatty acid synthesis, how is it modified
Definition
water is removed, double bonds form between carbon 2 and 3, butyryl is made and three terminal carbons are attached to acyl carrier protein by fatty acid synthase
Term
how is a fatty acid elongated
Definition
repeat actions of fatty acid synthase at transfer of butyryl to CiS at fatty acid
Term
how many carbons are added a round of elongation
Definition
2
Term
how many times can a fatty acid be elongated
Definition
7
Term
what is the product of the actions of fatty acid synthase
Definition
palmitoyl-S-CoA
Term
what happens to palmitoyl-S-CoA
Definition
palmitoyl thioesterase cleaves thioester bond making palmitate (16:0)
Term
what happens if we need palmitate to be further elongated
Definition
palmitate goes to the smoother ER and 2 carbon units are added from malonyl CoA and reduction of NADPH, special enzymes are used for each addition
Term
where in the body are there very long chain fatty acids
Definition
brain lipids
Term
how are fatty acids desaturated
Definition
smoother ER has desaturases that desaturate long chain FA, introducing CIS usually between C9 and C10
Term
how is fatty acid stored as TAG
Definition
esterified via carbonyl group to carbons of glycerol, acid loses its charge forming neutral TAG
Term
describe the structure of TAG, what is on each carbon
Definition
carbon 1 is saturated FA
carbon 2 is unsaturated FA
carbon 3 is either
Term
describe the solubility of TAG
Definition
slightly soluble in water, cannot form micelles independently, can coalesce and form oil drops
Term
what are the building blocks in TAG synthesis
Definition
glycerol phosphate and acyl CoA
Term
what is the role of glycerol phosphate in TAG synthesis
Definition
initial acceptor of activated FA during TAG synthesis
Term
what is the role of acyl CoA in TAG sythesis
Definition
free FA must be converted to activated form
Term
what is the first step in TAG synthesis
Definition
synthesis of glycerol phosphate backbone
Term
how is glycerol phosphate made in adipose and liver
Definition
glucolytic path turns glucose into DHAP and DHAP is reduced to glycerol phosphate by glycerol kinase
Term
how is glycerol phosphate made in the liver only
Definition
glycerol kinase converts free glycerol into glycerol phosphate
Term
what is the second step in TAG synthesis
Definition
fatty acyl CoA synthase (thiokinases) turn free FA into acetyl CoA
Term
what attaches FA to backbone in TAG, what must then occur
Definition
acyl transferase, phosphatase removes phosphate
Term
what is the final step in fatty acid synthesis
Definition
acyl transferase adds third FA
Term
what is the difference between a chilomicron and a VLDL
Definition
chilomicron delivers exogenous dietary acquired lipids, VLDL delivers deo novo synthesized lipids
Term
where does NADPH for fatty acid synthesis come from
Definition
mostly hesosemonoophosphate (HMP) shunt, malate oxidation and decarboxylation by malic enzyme
Term
how does the hexosemonophosphate shunt work
Definition
G6P DH is rate limiting and irreversible, it uses NADP as a coenzyme acceptor to oxidize G6P
Term
for each hexosemonophosphate shunt round, how many NADPH are made
Definition
2
Term
what does the malic enzyme do
Definition
oxidizes and decarboxylates malate to pyruvate, NADP is a coenzyme acceptor to oxidize malate generating NADPH
Supporting users have an ad free experience!