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Biochem Ch. 7.1-7.2
Biochem Ch. 7.1-7.2
43
Biochemistry
Undergraduate 3
01/06/2018

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Term
kinetics
Definition
study of chemical rxns
Term
enzyme kinetics
Definition
study of the rates of enzyme-catalyzed rxns
Term
velocity of a rxn (V)
Definition
quantity of reactant that disappears in a specified unit of time
Term
how to calculate velocity of a rxn (V)
Definition
V = -d[A]/dt = d[P]/dt

V = velocity of rxn
d = decrease in substrate concxentration or increase in product concentration
t = time
A = reactant A
P = product P
Term
velocity of rxn (V) vs. rate constant (k)
Definition
V = k[each reactant]

V = velocity of rxn
k = rate constant
Term
first-order rxn
Definition
rxn in which the velocity is directly proportional to the reactant concentration have unit s-1
Term
second-order rxn
Definition
rxn that includes 2 reactants have units M-1 s-1 (per mole per second)
Term
pseudo-first-order rxns
Definition
second-order rxns that appear to be first-order rxns
Term
zero-order rxn
Definition
rxn in which rate is independent of rxn concentration
Term
rate equation of a first-order rxn
Definition
V = k[A]
Term
rate equation of a second-order rxn
Definition
V = k[A]2 or V = k[A][B]
Term
this is a necessary intermediate in catalysis
Definition
a specific ES complex
Term
Michaelis-Menton equation
Definition
V0 = Vmax X ([S]/([S] + KM)) V0 = initial velocity Vmak = maximum velocity S = substrate KM = Michaelis constant
Term
Michaelis constant
Definition
KM = (k-1 + k2)/k1
Term
how to calculate Vmax
Definition
Vmax = k2[E]T
Term
when Vmax can be obtained
Definition
when total enzyme (ET) is attained
Term
when the enzyme is said to be saturated
Definition
when all the available enzyme is bound to the substrate and displaying zero-order kinetics
Term
KM is equal to...
Definition
the substrate concentration at which the rxn velocity is half its maximal value
Term
Lineweaver-Burk equation
Definition
1/V0 = (KM/Vmax) X (1/S) + (1/Vmax)
Term
the KM value of an enzyme varies based on...
Definition
substrate and environmental conditions
Term
enzymes when substrate concentration is below KM
Definition
enzymes have little activity and are sensitive to changes in substrate concentration
Term
enzymes when substrate concentration is above KM
Definition
enzymes have much activity and are insensitive to changes in substrate concentration
Term
enzymes when substrate concentration is approximately KM
Definition
enzymes have much activity and are sensitive to changes in substrate concentration
Term
maximal velocity (Vmax) reveals...
Definition
an enzyme's turnover number
Term
an enzyme's turnover number
Definition
the number of substrate molecules than an enzyme can convert into product per unit time when the enzyme is fully saturated with substrate
Term
this limits theb rate of formation of the ES complex
Definition
diffusion; can't be faster than the diffusion controlled enzyme-substrate encounter
Term
kinetic perfection
Definition
when catalytic velocity is restricted only by the rate at which enzymes encounter substrate in the solution
Term
when enzymes have kinetic perfection
Definition
when they have their Kcat/KM ratios at their upper limits
Term
the 2 classes of multiple substrate rxns
Definition
1: sequential rxns
2: double-displacement rxns
Term
sequential rxns
Definition
all substrates must bind to the enzyme before any product is released
Term
bisubstrate rxn
Definition
rxn where a ternary complex forms
Term
ternary complex
Definition
consists of enzyme and both substrates
Term
the types of sequential mechanisms for sequential rxns
Definition
-ordered
-random
Term
ordered mechanism for sequential rxns
Definition
substrates bind to the enzyme in a defined sequence
Term
double-displacement (ping-pong) rxns
Definition
one or more products are released before all substrates bind the enzyme
Term
the defining feature of double-displacement rxns
Definition
the existence of a substituted enzyme intermediate
Term
substituted enzyme intermediate
Definition
in a double-displacement rxn, this is when the enzyme is temporarily modified
Term
representation of sequential rxn
Definition
[image]
Term
representation of double-displacement rxn
Definition
[image]
Term
which parameter of an enzyme-catalyzed rxn depends on enzyme concentration?
Definition
Vmax (maximum velocity)
Term
KM is the equivalent of...
Definition
Substrate concentration when 1/2 Vmax is reached
Term
what parameter of an enzyme-catalyzed rxn is a measure for the affinity of its substrate?
Definition
KM
Term
When a substrate concentration is MUCH greater than KM, the rate of catalysis is almost equal to...
Definition
Vmax
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