Shared Flashcard Set

Details

BIO part 2
cell structure, function, and early development
116
Biology
Undergraduate 2
11/08/2010

Additional Biology Flashcards

 


 

Cards

Term
prokaryotes
Definition
bacteria, archaea

unicellular, no nucleus (DNA in region called nucleoid), cell wall
Term
flagellae
Definition
long whip-like projections for swimming
Term
pili
Definition
thread-like structures projecting from the surface, help bacteria adhere to other cells
Term
penicillin
Definition
kills bacteria by inhibiting the synthesis of the bacterial cell wall
Term
streptomycin
Definition
inhibits the synthesis of bacterial proteins and kills bacteria by selectively acting on the bacterial ribosome
Term
eukaryotes
Definition
unicellular or multicellular, have nucleus, larger than prokaryotes (10-100x), have organelles, cytoskeleton, endomembrane system
Term
nucleus
Definition
largest organelle, has DNA, bounded by double membrane (nuclear envelope)

fairly rigid bc under inner membrane is a strong meshwork of filaments called the nuclear lamina
Term
nucleoli
Definition
inside nucleus, not membrane bound, location of genes for making rRNA, place where ribosomes are partially made
Term
nuclear pore complexes
Definition
channels to enable passage of selective macromolecules into and out of the nucleus
Term
nuclear basket
Definition
protein fibrils on the nuclear side of the pore
Term
mitochondria
Definition
processes and transforms energy, produces ATP

mediates programmed cell death (apoptosis)

enclosed by double membrane, has cristae, inner membrane has ATP synthase (for making ATP)
Term
cristae
Definition
shelf-like structures on the inner membrane of mitochondria

(outer membrane is smooth and serves as a barrier)
Term
matrix
Definition
innermost compartment of mitochondria, contains ribosomes and DNA
Term
plastids
Definition
double membrane

found only in plants and protists

photosynthesis and storage
Term
chloroplasts
Definition
organelles found in higher plants and some protists that carry out photosynthesis

bound by 2 membranes: smooth outer, highly folded inner
Term
grana
Definition
stacks of membrane sacks (thylakoids)

thylakoid membranes contain chlorophyll and other light-absorbing pigments for photosynthesis
Term
stroma
Definition
inside region of chloroplasts, contains DNA and ribosomes
Term
chromoplasts
Definition
organelles filled with red, yellow, orange pigments, synthesize and store pigments- attractant for pollinating insects
Term
leucoplasts
Definition
depots for synthesis and storage of starch and fats-- located in roots and non-photosynthetic tissues
Term
lysosomes
Definition
vesicles containing digestive enzymes, part of intracellular digestive system

breakdown macromolecules (proteins, polysaccharides, nucleic acids, lipids, and bacteria)
Term
tay-sachs disease
Definition
lysosomes unable to degrade certain membrane glycolipids, which accumulate abnormally in the lysosomes within brain cells
Term
peroxisomes
Definition
granular or crystalline interiors, contain enzymes for destroying toxic peroxides (like hydrogen peroxide)
Term
plant vacuoles
Definition
storage of toxic waste materials (may be distasteful or poisonous for predators), storage of food and nutrients, provides stiffness

contractile vacuoles in freshwater protists aid in water balance
Term
plant vacuoles
Definition
storage of toxic waste materials (may be distasteful or poisonous for predators), storage of food and nutrients, provides stiffness

contractile vacuoles in freshwater protists aid in water balance
Term
cytoskeleton
Definition
functions in cell structure and movement

-actin filaments/ microfilaments
-microtubules
-intermediate filaments
Term
actin filaments
Definition
assemble and disassemble by noncovalent, reversible, addition/loss of actin monomers at the ends of the filaments (assembly at one end, disassembly at minus end) NO DIFFERENT CHARGES

determine cell shape, cell movement
Term
stress fibers
Definition
bundles of actin filaments, help keep cells elongated
Term
microvilli
Definition
stableactin bundles projecting from the cell surface, increases the cell's surface area
Term
focal adhesions
Definition
places where the actin cytoskeleton attaches to the cell membrane
Term
microtubules
Definition
hollow tubes made of tubulin dimers, have plus and minus end

occur in mitotic spindles, cilia, flagellae

function: cell shape, cell movement

carry out dynamic instability and treadmilling
Term
dynamic instability
Definition
switching between growth and shortening at microtubule ends
Term
treadmilling
Definition
growth at plus ends and shortening at minus ends
Term
centrosomes
Definition
where microtubules are organized

also called microtubule organizing centers

found near the nucleus and consist of a stable pair of centrioles that is surrounded by an ill-defined pericentriolar matrix
Term
dynein motor proteins
Definition
enzymes that use ATP to create movement, make microtubules slide past each other which causes bending (Cilia and flagella)
Term
intermediate filaments
Definition
very stable, used for support

nuclear lamins (support nucleus, attachment points for DNA), keratin filaments (skin, hair), neurofilaments
Term
plasma membrane
Definition
phospholipid bilayer, contains and holds contents of the cell, selectively blocks passage of some molecules from one side to the other, and permit passage of others
Term
passive diffusion
Definition
permits crossing of molecules that can dissolve in/ cross through the lipid portion of the membrane

flow is with concentration gradient, no energy required

water can pass through imperfections in lipid bilayer, lipid-soluble uncharged molecules can diffuse through
Term
carrier mediated diffusion
Definition
transported molecules are helped by receptor proteins/carriers in the membrane that can bind to the molecule

no energy required, with concentration gradient
Term
active transport
Definition
carriers use ATP to pump molecules against concentration gradients, transport only goes one way
Term
uniportors
Definition
transport one substance in one direction
Term
symportors
Definition
transport 2 different substances in the same direction
Term
antiportors
Definition
transport 2 different substances in opposite directions
Term
gated
Definition
when active transport channels are blocked by either chemical substances or voltage differences across the membrane
Term
endocytosis
Definition
process by which complex molecules, large particles, bacterial cells, and water can enter cells

involves formation of membrane vesicles- part of plasma membrane forms around particle and brings it into cell
Term
phagocytosis
Definition
large particles and small cells are engulfed inside vesicles
Term
pinocytosis
Definition
cell drinking, cells take up water into vesicles
Term
receptor-mediated endocytosis
Definition
macromolecule binds to receptor on the cell surface forming a coated pit, clathrin surrounds vesicle

vesicle sometimes fuses with a lysosome, which digests contents of vesicle (ex: LDL endocytosis)
Term
familial hypercholesterolemia
Definition
absense of a functional LDL receptor prevents cholesterol from entering the cells, and it accumulates in the blood
Term
exocytosis
Definition
secretory vesicle inside the cell fuses with the plasma membrane, vesicle contents are dumped out side the cell
Term
endomembrane (internal membrane) system
Definition
dense network of closed membrane tubules, closed vesicles, and closed sacs

sequesters molecules in the cytoplasm into membrane vesicles or sacs, transports sequestered molecules from place to place in the cytoplasm, moves sequestered molecules into and out of the cell, chemical modification of sequestered molecules
Term
endoplasmic reticulum
Definition
divides cytoplasm inside and outside membrane sac/vesicle space
Term
rough ER
Definition
close to the nucleus, ribosomes are attached to the outside of membranes, injects proteins into internal space
Term
smooth ER
Definition
no ribosomes, contains metabolic enzymes
Term
Golgi complex
Definition
stacked series of flattened membrane sacks- for modifying proteins, carbohydrates

cis (in section), medial (middle section), trans (out section)
Term
extracellular matrix
Definition
strong fibrous network between cells that holds cells together to form tissues and organs, made in cells and then secreted to the outside, made of large glycoproteins, e.g. collagen
Term
plant cell wall
Definition
strong and thick, extracellular structure, maintains cell rigidity
Term
animal cell junctions
Definition
helps cells adhere to each other, facilitates communication between cells and facilitates or blocks transport of molecules between cells, extracellular matrix
Term
tight junctions
Definition
bar the movement of dissolved materials through the space between epithelial cells, do not allow movement of membrane proteins inside the membrane bilayers themselves
Term
desmosomes
Definition
link adjacent cells tightly but permit materials to move around them in the intercellular space
Term
gap junctions
Definition
let adjacent cells communicate, permits passage of large molecules between 2 cells, made of special connecting protein channels that can open and close called connexons
Term
binary fission
Definition
cell division in prokaryotes, bacterial chromosome is usually attached to cell mbembrane at the ori

after the DNA replicates, the attachment points of the 2 chromosomes move apart as the cell elongates, making new membrane-taking the rest of the chromosome along

cells pinch off in the center, forming 2 cells
Term
S phase
Definition
period of DNA synthesis
Term
M phase
Definition
mitosis (chromosome separation)
Term
interphase
Definition
G1, S, G2
Term
cyclin-dependent kinases
Definition
control the eukaryotic cell cycle, place phosphate groups on various targets that are cell cycle control molecules
Term
retinoblastoma
Definition
RB, type of childhood cancer, RB's normal function is to inhibit the cell cycle in G1 at the restriction point, when RB gets phosphorylated bt the G1-S cyclin-cdk, it becomes inactive and the cell can progress into S (if kinases are active at wrong times, can lead to cancer)
Term
histones
Definition
proteins complexed with DNA, together they compose chromatin
Term
nucleosome
Definition
basic histone-DNA unit, beadlike, DNA wound around a core of 8 histone molecules
Term
H1
Definition
special histone protein, clamps DNA onto histone core
Term
linker DNA
Definition
short stretch of DNA linking nucleosomes
Term
chromatid
Definition
each copy of DNA, 2 chromatids held together at centromere
Term
centromere
Definition
where 2 chromatids are held together
Term
telomeres
Definition
ends of chromatids
Term
karyotype
Definition
display of all the chromosomes of an organism
Term
mitosis
Definition
process used by eukaryotic cells to separate the chromosomes when they divide into 2 daughter cells, 2 identical chromatids of each chromosome in the parent cell separate from each other- one goes to one of the daughter cells and the second goes to the other daughter cell
Term
prophase
Definition
cytoskeleton breaks down, endomembrane system is dispersed, chromatin condesnes to the mitotic chromosome form, centrosomes move to opposite sides of the nucleus and become the 2 poles of the mitotic spindle (spindle poles)
Term
prometaphase
Definition
nuclear envelope breaks down, kinetochore forms at the centromere of each chromatid, microtubules attach to the chromosomes which can now move to build the spindle
Term
metaphase
Definition
chromosomes aligned at metaphase plate (center of the spindle), building of mitotic spindle is completed

metaphase checkpoint- surveillance checkpoint, cell is ensuring that the spindle is fully formed and is set to go
Term
anaphase
Definition
cohesin proteins holding the 2 chromatids of each chromosome together are destroyed, one of the chromatids of each duplicated chromosome moves to one pole, and the other chromatid moves to the opposite pole
Term
telophase
Definition
cleavage furrow or cell plate forms, spindle microtubules disassemble, nuclear envelope re-forms around the cluster of chromosomes at each pole, chromosomes de-condense to the interphase form
Term
kinetochore microtubules
Definition
extend from the poles to kinetochore
Term
interpolar microtubules
Definition
extend from the poles toward the opposite poles
Term
astral microtubules
Definition
extend from the poles away from the spindle in an aster-like formation
Term
spindle building process
Definition
microtubules cast out from poles with plus ends leading, hook onto a chromosome at the kinetochore of one of its chromatids, sister kinetochore gets hooked by a microtubule from the opposite pole, more microtubules become attached and the highly dynamic microtubules and motor molecules move the chromosome to the metaphase plate
Term
anaphase A
Definition
chromosomes move to the poles, microtubule disassemble at the poles and the motors positioned at the poles pull in the microtubules
Term
anaphase B
Definition
elongating microtubules push apart the poles
Term
cytokinesis
Definition
cell cleavage, works by combination of actin filament shortening and myosin-motor activity (as in muscle contraction)
Term
diploid
Definition
cells that have 2 complete sets of chromosomes, one from each parent
Term
haploid
Definition
cells that have only one complete set of chromosomes
Term
homologous chromosomes (homologs)
Definition
the pairs of chromosomes that match up (one from each parent), contain same genes but not identical
Term
zygote
Definition
when an egg cell is fertilized by a sperm cell
Term
re-assortment
Definition
occurs during meiosis as egg cells and sperm cells are formed and when egg cells and sperm cells combine to form the new individual
Term
haplontic organisms
Definition
zygote is the only diploid cell in the life cycle (protists, fungi, and some green algae)
Term
diplontic organisms
Definition
games are the only haploid cells in the life cycle (animals, brown algae, some fungi)
Term
phrophase I
Definition
2 homologs of each pair become attached to each other in a process called synapsis (called bivalents or tetrads)
Term
crossing over
Definition
genetic recombination occurs between chromatids of 2 homologs, results in reciprocal exchange of DNA- causes the re-assortment of genes
Term
metaphase I
Definition
chromosomes line up at the metaphase plate with the tips of the homologs attached to each other, the kinetochore of one homolog is attached to one pole, the kinetochore of the other homolog is attached to the opposite pole
Term
anaphase I
Definition
one entire homolog with its 2 chromatids goes to one daughter cell, the other homolog goes to the other daughter cell, this is the stage in which the cells go from the diploid (2n) to haploid (1n) state
Term
meiosis II
Definition
usually follows immediately after meiosis I without DNA synthesis

2 chromatids of each remaining chromosome separate from each other, and they go to opposite poles
Term
spermatogenesis
Definition
starting cell is a germ cell (2n) which in males divides by mitosis to form a spermatogonium (2n), this cell then divides by mitosis to form 2 2n primary spermatocytes

then each primary spermatocyte divides by meiosis I to produce 2 haploid (n) secondary spermatocytes

then 2 secondary spermatocytes divide by meiosis II to produce four haploid (n) spermatids

finally, 4 spermatids differentiate into 4 mature haploid sperm cells (spermatozoa)
Term
oogenesis
Definition
only 1 daughter cell becomes egg, rest are polar bodies that die
Term
aacrosomal vesicle
Definition
secretory vesicle in head of the sperm
Term
neck/midpiece
Definition
in sperm, contains a mitochondrion that supplies ATP to power the dynein required for microtubule sliding and movement
Term
tail
Definition
in sperm, contains 9+2 arrangement of microtubules and the motor molecule dynein
Term
acrosomal reaction
Definition
acrosomal enzymes digest the jelly coat
Term
fertilization
Definition
bindin binds to bindin receptors on egg, cortical vesicles are expelled from egg by exocytosis and dump contents between vitelline envelope and plasma membrane, fertilization envelope lifts and hardens around the egg, which produces the slow permanent block to polyspermy

sperm and egg nucleus unite -> diploid state
Term
phase 1
Definition
cell cleavage and organization of the body plan
Term
phase 2
Definition
organogenesis (development of the organ systems
Term
phase 3
Definition
growth
Term
blastomeres
Definition
cells at the early stages
Term
morula
Definition
solid ball of blastomeres
Term
blastula stage
Definition
first stage that shows development of form, have cavity called a blastocoel
Term
ectoderm
Definition
(becomes distinct during gastrula stage), outermost layer that develops into nervous system, skin, hair, nails
Term
mesoderm
Definition
middle layer, which develops into the skeletal system, bones, heart, kidneys, blood vessels)
Term
endoderm
Definition
innermost layer, which develops into the respiratory tract, liver, pancreas, and gut
Term
gastrula stage
Definition
body plan is produced, organ systems begin to form
Supporting users have an ad free experience!