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BGSU Bio 104 Exam 4
Chapters 7-8
127
Biology
Undergraduate 1
11/30/2006

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Term
Heredity
Definition
Passing along of traits from one generation to the next.
Term
Genetics
Definition
The study of heredity (genes).
Term
Genes
Definition
Set of instructions (described by DNA that a child receives from each parent.
Term
Gregor Mendel
Definition
Work:1856-18-1863
Austria
Scientist and Monk
• Educated in a monastery
• Became a monk and joined the local science club
– Counted the number of offspring in crosses involving pea plants
Term
Early Ideas About Heredity-1600's
Definition
• British farmers tried similar crosses
• Noted that some had stronger tendency to pass traits to offspring.
Term
Knight
Definition
• White X purple flowers
– All offspring were purple
– F2 = white and purple
Term
Garden Pea
Definition
Many varieties available
– Previous work done with them
– Small and grow quickly
– If left alone they will self pollinate
-Easy to cross pollinate
Term
Mendel's Experimental design
Definition
True Breeding varieties-only one type of gene for each trait.
EX: purple vs. white flowers
Term
Generations (3 types)
Definition
-P Generation (parental) 1st
-F1 Generation (filial) 2nd
-F2 Generation (filial) 3rd
-From two members of F1
-Self pollinate
Term
F1 Generation
Definition
Purple X White flowers.
-all of the F1 was purple.
-Dominant trait (expressed in F1 (purple)
-Recessive trait (not expressed by the F1, white)
Term
F2 Generation
Definition
Self Fertilize F1
3:1 ratio between dominant and recessive
Had been done before but Mendel counted the offspring and discovered this ratio.
Term
F3 Generation
Definition
F2=Disguised 1:2:1 Ratio
-1 "true breeding" dominant
-2 non "true breeding" dominant
.Purple
-1 "true breeding" recessive
.White
Term
Mendel's Theory
Definition
Each individual has two factors (genes) for each trait.
Homozygous and Heterozygous
Term
Homozygous
Definition
Both genes are the same.
Term
Heterozygous
Definition
Both genes are different.
-The dominant gene is expressed by the recessive trait is still carried and can be passed on.
Term
Alleles
Definition
Alternative forms of a gene.
ex:white or purple
p or P
Term
Lowercase (p)
Definition
Recessive (white)
Term
Uppercase (P)
Definition
Dominant (purple)
Term
Phenotype
Definition
The Appearance
Term
Genotype
Definition
The actual alleles present
Term
Punnett Squares
Definition
all possible genotypes
Term
Probability
Definition
The likelihood of getting one particular genotype in the offspring.
Term
Testcross
Definition
Determines the genotype of an individual expressing a dominant trait.
EX: PP 25% (homozygous dominant)
Pp 50% (heterozygous dominant)
pp 25% (homozygous recessive)
Term
Mendel's First Law: Law of Segregation
Definition
Somatic Cells contain two copies of each gene (alleles).
Only one per gamete. Gametes combine randomly.
Dominant masks recessive allele.
Alleles must seperate during meiosis
Term
Mendel's Second Law:Law of Independent Assortment
Definition
Determined while working with dihybrid crosses.
-working with two traits at the same time.
-Genes located on different chromosomes are inherited independently.
Term
Mendel's theory was considered a big flop True or False?
Definition
True. Scientist weren't looking for anything. Didn't discover all traits. Theory was rediscovered in 1900, 16 yrs after Mendel's death.
Term
Incomplete Dominance
Definition
When offspring exhibit a phenotype intermediate to that of both parents
• Ex. Snapdragons
• NOT blending
– The original traits come back in F
Term
co-dominance
Definition
Sometimes more than two alleles exist for a given trait in a population of
individuals
Term
ABO Blood Type
Definition
A & B are proteins that cover the RBC surface
• Equally dominant
• “O” means absent
• Chromo #9
Term
Type A
Definition
IAIA or IAi
Term
Type B
Definition
IBIB or IBi
Term
Type AB
Definition
(universal receiver)
– IAIB
Term
Type O
Definition
(universal donor)
– ii
Term
Rh Blood Group
Definition
– Cell surface marker on RBC
– 85% is Rh+
– Rh- mother bears an Rh+ fetus
• During child birth blood crosses
• Mom begins make Rh- to attack Rh+
t Involves 45 different antigens on the surface of RBC that are controlled by 2
closely linked genes on chromosome 1.
t Maternal antibodies can cross the placenta and destroy fetal red blood cells.
t The risk increases with each pregnancy.
Term
Continuous Variations
Definition
Sometimes one trait is determined by several genes and multiple alleles Continuous variation for the trait within a population
– Ex. Human height
Term
Pleiotrophic Effects
Definition
When an allele effects more than one trait
• One gene has many effects
• Genes work together in an interrelated web
Term
Examples of Pleiotrophic Effects
Definition
Cystic fibrosis-– Clogged blood vessels
– Overly sticky mucus
– Salty sweat
– Liver and pancreas failure
– Etc.
– Protection against cholera
• Disease that kills through profound fluid loss
Sickle-cell anemia-Protection from maleria
Fragile-X syndrome-One gene, but phenotype includes
• Lower IQ
• Abnormally long faces
• Large, protuberant ears
• Large testicles in males
Term
Epistasis
Definition
– Two separate genes that effect each other
– Must have a homozygous recessive gene to produce white corn
• Gene A
– allows purple pigment to be deposited on seed coat
• Gene B
– Produces purple pigment
Term
Enviromental Effects
Definition
– Some alleles are heat sensitive
– Different pigmentation during seasonal weather changes.
• Ex. Arctic Fox
Term
What other structures besides chromosomes divide and segregate?
Definition
Centrioles
Mitchondria
Cholorplasts
Term
Karl Correns
Definition
– 1900
– Rediscovered Mendel’s work
– Similar chromosomes paired during meiosis
Term
Walter Sutton
Definition
– 1902
– Chromosomal theory of inheritance
– Scientists were still skeptical!
Term
Thomas Hunt Morgan
Definition
– Drosophilia melanogaster (Fruit Fly)
• New generation every 12 days
– 1910
– Found a white eyed male mutant
• Red is normal
• White X Red
– F1 were all red eyed
• red is dominant
– F2 produced white eyed flies
• All the white eyed flies were made
– Crossed F1 female with the original white eyed male.
• White eyed female!
"• Sex Linked Trait"
– Attached to the X and Y chromosomes that determine sex.
– Y chromosome has very few functional genes
– Genes are carried on chromosomes, and Mendel’s laws are true
– Many mutations!
• Small wings
– same chromo as white eye
– Crossing over!!
• Short wings
• Short legs
• Black body
• Curved wings
– Nobel prize in 1934
Term
X-linked Conditions
Definition
– Problem w/ genes that make proteins located on X chromo
– Most are recessive
Term
Hemophilia
Definition
X-linked condition
Faulty blood clotting
• Group of proteins
Term
Duchenne Muscular Dystrophy
Definition
X-linked condition
– Wasting of muscles (2-10 yrs)
Term
Red-green color blindness
Definition
X-linked condition
Color blind
– Male = 8%
– Female = 0.5%
Term
Autosomnal recessive disorder
Definition
– Sickle Cell anemia
– Cystic Fibrosis
– Tay-Sachs
Term
Autosomnal Dominant disorder
Definition
Polydactyly
• Extra fingers or toes
• Ernest Hemmingway’s cats
– Huntington Disease
• Brain tissue degeneration
Term
Aberrations in chromo #
Definition
– Down Syndrome
• Mental retardation
– Turner syndrome
• Sterile
• Short
– Kleinfelter syndrome
• Feminized features
Term
Aberations in chromo structure
Definition
Fragile-X Syndrome
• Mental retardation
Term
Human Chromosomes
Definition
Humans have 46 chromosomes (23 pairs)
– Vary in size shape and appearance
Term
Karyotype
Definition
– Photographing of chromosomes
– An individual’s particular array of chromosomes
Term
Nondisjunction
Definition
– During meiosis, the homologous chromosomes (sister chromatids) do not separate
properly
– Leads to aneuploidy
Term
Aneupoidy
Definition
Having an abnormal number of chromosomes
Term
Nondisjunction Involving Autosomes
Definition
Monosomics
Trisomics
Down Syndrome
Term
Monosomics
Definition
one of a particular chromo
Term
Trisomics
Definition
three copies of a
Term
Down Syndrome
Definition
– Trisomy 21
– mental impairment & physical defects
Term
XXX "Triple X"
Definition
Female who is sterile but usually normal in other respects
Term
XXY "Klinefelter Syndrome”
Definition
Sterile male
• female body characteristics
• diminished mental capacity in some
• 1/500 male births
Term
OY
Definition
• Nonviable and fails to develop
• Humans cannot survive with out the X chromosome
Term
OX "Turner Syndrome"
Definition
• Sterile female
• short
• webbed neck
• immature sex organs
– No changes during puberty.
• Mental abilities are low to normal
• 1/5,000 female births
Term
X chromosomes fail to separate during meiosis
Definition
• XX gametes.
• “O” gametes
Term
When Y chromosomes fail to separate during meiosis
Definition
– YY gametes
– “O” gametes
Term
XYY "Super Male"
Definition
• Fertile male of normal appearance
• 1/1,000 male births
• 20x higher in prison and mental institutions
• However, most don’t develop patterns of antisocial behavior
Term
Mutations
Definition
• Accidental changes in genes
• Almost always bad
• Recessive allele
Term
Pedigrees
Definition
Family trees
• Indicate inheritance of the mutation.
• Used to study human heredity (genetic disorders)
Term
History Genes
Definition
– 1920’s
• Chromos contain genetic info
– 1930s & 1940s
• DNA is the genetic info
• Genes bring about the production of protiens
Term
Nucleic Acids
Definition
DNA & RNA
Term
1928: The Griffith Experiment
Streptococcus pneumoniae (Bacteria)
Definition
Smooth Strain (polysaccharide coat)
-Killed mice

Rough Strain (no coat)
-No effect

Coat needed for infection.

However,dead smooth + live rough = mice died Hereditary info could thus be passed from dead cells to live ones!
Term
Transformation
Definition
DNA can be passed from dead strains of a pathogenic bacterium to transform a non-virulent strain into one that is pathogenic.
Term
1944: The Avery Experiments
Definition
Oswald Avery

Same as Griffith, but removed protein.

–Chromos are made of protein (Histones) and DNA
–Transforming activity
•Not Reduced- when protein removed
–by lipid and protein extraction
–by protein or RNA-digesting enzymes
•Stopped- when DNA removed
–by DNA-digesting enzymes
Term
1928: The Griffith Experiment-end result
Definition
Demonstrated conclusively that DNA is the hereditary material!!
–Not protein (common belief)
Term
DNA Viruses
Definition
-DNA is inserted into the host cell’s DNA as if they were the cells own genes
-DNA >>>> RNA
Term
RNA Viruses
Definition
–“Retroviruses”
–To infect cells
•DNA from the RNA
•The DNA copy may then insert into the host cell's DNA.
•Permanent!
–RNA>>>>DNA
Term
1952: Hershey- Chase Experiment
Definition
Avery’s results were not widely accepted.
–Most still thought genes were protein
Alfred Hershey & Martha Chase
Radioactive labels to mark DNA and protein of viruses.
Term
–DNA
Definition
•Radioactive phosphorus (32P)
Term
–Protein Coat
Definition
•Radioactive sulfur (35S)
Term
–DNA
•Radioactive phosphorus (32P)
–Protein Coat
•Radioactive sulfur (35S)
Definition
-Infected bacteria using r/a labels
–New viruses made by bacteria contained the r/a phosphorus (32P) but not the sulfur.
-DNA is the genetic material!
Term
1957: Fraenkel-Conrat Experiment
Definition
Ċ-Heinz Fraenkel-Conrat

Ċ-RNA-containing viruses

¡VWhy: nucleic acids = genetic material

-RNA from one virus was crossed with the protein of another similar virus
¡VHybrid virus painted on tobacco leaf
¡VProtein of offspring was from the original RNA
Term
DNA Structure
Definition
Late 1950's
-Nucleic Acid accepted as the genetic material
-Structure still unknown
Term
Chargaff-DNA always had equal amounts of:
Definition
Purines
Pyrimidines
Term
Purines contain-
Definition
Adenine and Guanine
Term
Pyrimidines contain
Definition
thymine and cytosine
Term
Chargaff's Rule
Definition
•Amounts of adenine equaled thymine and cytosine equaled guanine
–A=T
–G=C
Term
DNA has what?
Definition
A Regular Structure.
Suggested Base-Pairing.
Term
Rosalind Franklin
Definition
1953
X-Ray Visioned DNA=Helix
Term
Watson and Crick
Definition
–James Watson—23-year-old American, one year out of graduate school

–Francis Crick—35-year-old English graduate student

•Connected the ideas of a helix with base-pairing.

•DNA

–Sugar-phosphate backbone
–Base-pairing
–Double helix

•They also suggested a mechanism by which DNA was able to copy itself
Term
How the DNA Molecule Replicates:
Definition
Nitrogenous Bases
–“nucleotides”
–A,T ,G,C

Complementary Base Pairs
–ATTGCAT
–TAACGTA

Semiconservative Replication
–When DNA copies itself
–Each existing strand serves as a template for a new complementary strand
–One new, one old
Term
1958 :The Meselson Stahl Experiment
Definition
Matthew Meselson & Franklin Stahl

Semiconservative replication was tested using 14N and the heavy isotope 15N.

Exp.
–Parental
•All heavy strands (15N)
•Placed in medium of light (14N)
Term
1958 :The Meselson Stahl Experiment Results:
Definition
–F1
•Light & heavy

–F2
•Light & heavy
•Both light
Term
DNA polymerase
Definition
-enzyme
-oversees the operation
-Replaces complementary nucleotides on parent strands.
Term
Helicase
Definition
-Unzips DNA-1000 nucleotides at a time
-•Replication Fork.
Term
DNA Ligase
Definition
–Enzyme
–Bonds sugar-phosphate backbone
Term
Error rate
Definition
–minimized by DNA polymerase proofreading
–Bacterial polymerase
•1/100,000 mistakes
•1/1,000,000 kept
Term
Mutations
Definition
A.Mutation = permanent change in DNA sequence
How does the checking mechanism know which strand is correct?
–Binding Protiens
•which strand is older

B.Almost all cancers begin as a mutation that is passed along at replication.
1. somatic cells
2. rate is low
–After decades of accumulated mutations, cells can become malignant.

C.Heritable Mutations
–Germ-line cells
•Divide to become egg/sperm
–Create genetic diversity!
Term
Gene
Definition
–Hereditary unit consisting of a sequence of DNA that occupies a specific location on a chromosome and determines a particular characteristic in an organism.
Term
Proteins: Polypeptides
Definition
–Strands of amino acids (20 different) joined by peptide bonds.
–Every protein has a unique amino acid sequence.
Term
Transcription
Making Protein
Definition
–DNA >> RNA >> protein
•RNA is a
–“blueprint” copy of DNA

–Messenger RNA (mRNA)
–Ribosomal RNA (rRNA)
–Transfer RNA (tRNA)
Term
–Gene Expression
Definition
•1. Transcription
–mRNA is made in the nucleus

2. Translation
–mRNA leaves the nucleus and directs the production of a protein molecule.
Term
Transcription
Definition
–1. RNA polymerase
•binds to the DNA at the promoter
•moves along the DNA molecule

–2. mRNA is made
•nucleotide sequence is complementary to DNA
•But, Thymine is replaced with Uracil
•A=U
•G=C
Term
DNA
Definition
–Adenine = Thymine
–Guanine = Cytosine

–Double strand
–The sugar is deoxyribose
Term
RNA
Definition
–Adenine = Uracil
–Guanine = Cytosine

–Single strand
–The sugar is ribose
Term
Promoter Site
Definition
Site where the RNA polymerase first binds to DNA.
Term
RNA Polymerase
Definition
Moves down DNA in steps of 3 nucleotides
Term
3 Nucleotide Block
Definition
–Each block = an amino acid
–codon
Term
Codon
Definition
–mRNA sequence that corresponds to the 3-nucleotide sequence on DNA
–Ex. AUG/GCU/UAA

64 possible codons
–Same for all
Term
Translation
Ribosomes (Ribo)
Definition
–Make proteins
–Follow mRNA blueprint
–In the cytoplasm

–Made of
•proteins
•rRNA
Term
TRNA
Definition
– nticodon at one end
•a sequence of three nucleotides complementary to a mRNA codon.

–Amino Acid (AA) at other end
•corresponds with the codon of the mRNA
Term
Making the Protein
Definition
–tRNA
•brings the correct amino acid into position along the mRNA molecule (held by ribo)

–Ribosome
•proceeds along mRNA,
•next AA is added to peptide chain.

–When finished
•ribo falls apart
•completed protein released
Term
Introns & Exons
Definition
–Prokaryotic DNA
•continuous sequence of genes with no interruptions.

–Eukaryotic DNA
•Exons-gene sequences that code for amino acids
•Introns- intervening, nonusable sequences of nucleotides

–must be removed from mRNA before translation can occur.
–97% of your DNA!!!
Term
Multigene families
Definition
–multiple copies of each gene!
–Most genes
–Clusters of almost identical sequences
–Few to several hundred
Term
Junk DNA
Definition
–50,000 segments of CACACACAC.….
–Primates Alu repeat
•280 base pairs
•1 million times!
•10% of your DNA
•DNA virus?
–Selfish DNA
•Only purpose is to copy itself
Term
Transposons:
Definition
–genes that jump from one position to another on a chromosome,
–preventing expression of gene sequence.
–no functional role

•“molecular parasites”
•May transfer genetic properties such as resistance to antibiotics.
•45% of human genome!
Term
Mutations in Germ-line Tissues
Definition
–Only when a mutation occurs within a germ-line cell is it passed to subsequent generations
Term
Mutations in Somatic Tissues
Definition
–Changes in somatic cells are not passed on from generation to generation.
–A somatic mutation may have drastic effects on the individual in which it occurs.
–Ex. Lung Cancer
Term
Point Mutations
Definition
–Point mutations are changes in the hereditary message of an organism that involve only one or a few base pairs of the coding sequence
Term
–Base Substitution
Definition
•Identity of a base changes
Term
–Insertion
Definition
•Bases are added
Term
–Deletion
Definition
•Bases are lost
Term
–Frame-shift Mutation
Definition
•If insertion or deletion throws the reading of the gene message out of register
–Some mutations may arise spontaneously, while others are the result of exposure to mutagens.
Term
Changes in Gene Position–Transposition
Definition
.Individual genes may move from one place to another
•Its expression or the expression of neighboring genes may be altered
Term
–Chromosomal Rearrangements
Definition
•Large segments of chromosomes in eukaryotes may change their relative locations or undergo duplication
•Usually has drastic effects on the expression of the genetic message
Term
Carcinogens
Definition
–Agents thought to cause cancer.
Term
Chemical Carcinogenesis Theory
Definition
–The suspicion that chemicals contribute to the incidence of cancer
Term
Cancer and Mutation-Early Ideas
Definition
–John Hill
•English physician (1761)
•chemical carcinogenesis theory
–Noted unusual tumors of the nose in heavy snuff users.
–He believed that it was from the tobacco

–Observations in 1775 by Sir Pott, a London surgeon, suggested a relationship between soot and tar and scrotal cancer in chimney sweeps.

Demonstrating that Chemicals Can Cause Cancer
–In 1915, a Japanese doctor found tar applied to rabbits caused cancer.
–Since that time, it has been shown repeatedly that smoking cigarettes introduces tar into the lungs, leading to an increased rate of lung cancer.

Carcinogens Are Common
–Numerous chemicals have been found to be carcinogenic.
–They are all mutagens, capable of inducing changes in DNA.
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