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BCMB 2
Lecture 1/19/11
6
Biochemistry
Undergraduate 4
01/24/2011

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Term
side chain
Definition
aka R group. the variable part of the molecule that differentiates amino acids.
Term
isomers
Definition
most aas are L and not R configuration. how to tell: amino group is 1, carboxyl 2, R 3. counterclockwise = L clockwise = R
Term
chiral
Definition
a molecule that is not symmetric/ can't have a mirror image. Glycine is achrial, so it has symmetry
Term
methyl and CH2 groups
Definition
tend to be on the interior of proteins because they are hydrophobic and nonpolar
Term
aromatic side chains
Definition
phenylalanine, tryptophan and tyrosine. contain benzene-like "beryl" group or 5 membered/ 6 membered rings
Term
polar side chains
Definition
serine (OH), Threonine (OH and CH3) Asparagine (amide), Glutamine (amide, CH2)can use Hydrogen bonding
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