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Bacteria and bacterial diseases
Host Defense Unit One material
48
Microbiology
Graduate
03/28/2018

Additional Microbiology Flashcards

 


 

Cards

Term
Listeria monocytogenes
Definition

G+ bacilli, non-spore forming, motile (tumbles), catalase + 

 

 

Causes flu like symptoms in pregnant women and can be passed to unborn children, resulting in miscarriage. Also causes meningitis in newborns.

listeriosis - meningitis and sepsis in neonates and the immunocompromised

 

Tx: ampicillin (or penicillin w/ or w/o gentamicin (aminoglycoside); TMP-SMX

 

Often resistant to cephalosporin, macrolides, and tetracycline

 

 

 

 

Term
Genus Corynebacterium
Definition

more than 100 species, some are opportunistic 

 

Corynebacterium diptheriae is the major human pathogen

Term
Staphylococcus aureus
Definition

G+ cocci in clusters, catalase + & coagulase +

 

Toxic reactions: Food poisoning (enterotoxin), scalded skin syndrome (exfoliatin), toxic shock syndrome (superantigen, hypvolemia); superantigen → cytokine storm and possible death

Infection: Carbuncle/furuncle, impetigo, endocarditis, osteomylitis, pneumonia (secondary post-viral superinfection), cellulitis, meningitis, septic arthritis, wound infections

 

penicillin (most strains are resistant)

methicillin, nafcillin, oxacillin

MRSA (carries SCCmec element): vancomycin

 

tricuspid valve endocartitis in IV drug users

α-toxin archetypal β-barrel pore-forming membrane-damaging cytotoxin

Protein A - prevents opsinization

leading cause of poliomyelitis in children 

Term
Staphylococcus epidermidis 
Definition

G+ cocci in clusters, catalase + & coagulase - (CoNS)

novobiocin sensitive 

 

infection on indwelling medical devices (implants and catheters), endocarditis of mechanical heart valves

 

vancomycin 

(resistant to penicillins and cephalosporins) 

 

Neutropenic patients are the most susceptible 

Can lead to bacteremia (sepsis)

Skin flora can contaminate blood cultures

Term
Staphylococcus saprophyticus
Definition

G+ cocci in clusters, catalase + & coagulase - (CoNS)

novobiocin resistant

 

community acquired UTI

 

TMP-SMX (Bactrim, Sulfatrim, and Bactrim DS)

Term
Streptococcus pyogenes
Definition

G+ cocci in chains, catalase + & coagulase - (CoNS), β hemolytic, bacitracin sensitive; aka, Group A Strep

 

Toxin mediated: Scarlet Fever, TSS/TSLS, necrosis

Infectious: pharyngitis, skin infections (pyoderma (impetigo), erysipelas, and cellulitis)

Immune-mediated: Glomerulonephritis, Rheumatic Fever (Symptom management)

 

Penicillin G, clindamycin (TSS, to prevent SF toxin), cephalosporin, erythromycin, surgery and debridement

 

Treatment of pharyngitis is mandatory to prevent complications (eg, immune or toxin mediated responses, especially rheumatic fever). ASO titre can help predict rheumatic fever or GNitis

 

Virulence factors:

M protein: antiphagocytic, adhesive 

(involved in rheumatic fever) 

Lipoteichoic acid: binding to epithelial cells

F protein: adherance to epithelial cells

Streptolysins, O and S: lyse WBC, RBC, and platelets, promote spread

Streptokinase: lyse clots, promote spread

TST: superantigen

Encapsulated (Hyaluronic Acid)

pyogenic exotoxin A - Scarlet Fever

Term
Streptococcus agalactiae
Definition

G+ cocci in clusters, catalase + & coagulase - (CoNS), β hemolytic, bacitracin resistant, hippurate +, CAMP +; aka, Group B Strep

 

meningitis, pneumonia (especially in neonates)

 

Most common form of meningitis in newborns

Culture swaps from vaginal and rectum and 35 weeks to test for group B strep; give intrapartum PCN if +

encapsulated bacterium 

 

Term
Streptococcus bovis
Definition

G+ cocci in chains, catalase - grows in 40% bile, but susceptible to 6.5% NaCl; aka, Group D Strep

 

Low-grade fever and signs of endocarditis

 

Penicillin

 

Normal inhabitant of the lower GI tract, can penetrate the epithelium via lesions (eg. colon cancer or inflammed bowel)

Term
Streptococcus pneumoniae
Definition

G+ diplococci (lancet or football shaped), catalase - α hemolytic, bile-escullin negative, optochin sensitive; aka, pneumococci, "Quellung reaction", "rust-colored sputum"

 

meningitis, otitis media, lobular pneumonia, sinusitis & sepsis (bacteremia)

rare: osteomyelitis, septic arthritis, endocarditis

 

penicillin or celphalosporins, amoxicillin, fluoroquinolones, macrolides

vanocmycin if meningitis

Pneumovax: vaccine with capsular polysaccharides

 

Normal flora

Major cause of community acquired pneumonia

Asplenic pts are unable to remove Ab-coated organism (give Pneumovax)

Phosphorylcholine (binding) is unique to S. pneumoniae

IgA proteases contribute to virulence

PCN resistance by altering PCN binding proteins

Term
Streptococcus mutans, Streptococcus intermedius 
Definition

G+ cocci in chains, catalase -, α hemolytic, bile-escullin negative (bile resistant), optochin resistant; aka, viridan streptococci

Quellung reaction

 

dental caries (mutans), brain or abdominal abscesses (intermedius), Subacute Bacterial Endocarditis (SBE)

 

penicilllin G

 

SBE: viridian streptococci and enterococci colonize valves previously damage by group A strep (Rheumatic fever)

Blood cultures of S. intermedius often indicates the presence of abscesses

 

dextrans allow adherence 

 

Term
Bacillus anthracis
Definition

Gbacilli, spore forming, aerobic, non-motile

 

malignant cutaneous pustules (black, surrounded by red border), dysentery, or inhalation anthrax

 

parenteral penicillin G, anti-PA vaccine (military)

fluoroquinolones (ciprofloxacin, levofloxacin, and moxifloxacin) and doxycycline 

 

Found in wool and goat skin.

Anthrax toxin:

Protective Antigen (PA) - binds

Edema Factor (EF) - ↑ adenylate cyclase activity

Lethal Factor (LF) - causes cell death, inhibits MAP Kinases and causes necrosis

Term
Bacillus cereus
Definition

Gbacilli, spore forming, aerobic, motile

 

food poisoning, eye infections (?)

 

symptom management (toxin from reheated food)

also found in soil

 

Term
Enterococcus faecalis, E. faecium, E. gallinarum
Definition

G+ cocci in chains or pairs, catalase -, variable hemolysis, grows in 40% bile and 6.5% NaCl aka. Group D enterococci 

 

UTI, biliary tract infection

can become systemic and colonize heart valves (endocarditis)

 

ampicillin, or vancomycin + aminoglycosides (synergistic)

VRE: linezolid, daptomycin, tigacycline

 

Biofilms

 

Frequent complication of biliary/hepatic surgery or indwelling catheters 

2nd most common cause of nosocmial infections in US due to high resistance

Term
Erysipelothrix rhusiopathiae
Definition

Thin G+ bacilli

 

localized skin infections

generalized cutaneous infections

septicemia w/ possible endocarditis

 

Penicillin, cephalosporins, erythromycin, clindamycin

Resistant to: sulfonamides, amnioglycosides, vancomycin

 

Zoonotic - butchers, zookeepers, etc. are at higher risk

Term
Corynebacterium diptheriae
Definition

G+ pleomorphic bacilli, non-spore-forming, non-motile, "Chinese letter" appearance, black colonies on potassium tellurite, Loeffler's medium, Elek's test demonstrates presence of toxin

 

C. diptheriae: diphtheria (complications: myocarditis), cutaneous diphtheria papule progressing to ulcer

colonizes: Respiratory tract, GI, GU, and skin

C. jeikeium: bacteremia

C. urealyticum: urease, UTIs, stones

 

DTaP (prevention)

antitoxin, PCN, erythromycin

 

asymptomatic normal flora

only cells infected with a specific lysogenic phage carry the toxin, EF-2 (elongation factor 2) which inhibits protein synthesis (activated by ribosylation) 

Bullneck

Psuedomembrane (scraping causes bleeding)

demylenates nerves in posterior pharynx 

death due to myocarditis

 

 

Term
Mycobacterium tuberculosis
Definition

Acid-fast bacilli (mycolic acids), non-motile, obligate aerobe, grows on Lownstein-Jensen agar

 

Primary infection: middle lobes

Reactivated infection: upper lobes

wasting, fever, bloody sputum

 

RIPES: rifampin, isoniazid (INH), pyrazinamide, ethambutol, streptomycin prophylaxis

Second line drugs: cell wall inhibitor (cycloserine, ethionamide), aminoglycosides (streptomycin, amikacin, kanamycin, cepreomycin), antimetabolite (para-aminosalicylic acid), fluoroquinolones (levoflloxacin, moxafloxacin, gatifloxacin)

Last line of defense: cllofazimine, bedaquiline

 

Oppurtunistic

Wax-mycolic acid coat, thick peptidoglycan layer, cell membrane

Multidrug-resistant

cord factor - sulfatides prevent fusion with lysosomes 

latent infections reactivates in 5% of cases (usually immune compromised), within macrophages

millet infection is potentially lethal 

Pott's disease (when TB affects the bones)

γ interferon for pts with vaccine 

exposure to M. bovis can cross react with skin test

Ghan focus - initial infection site (peripheral lung)

Term
M. leprae
Definition

Thin acid-fast bacilli, non-motile, obligate aerobe, grows at low temps, phenolase +

 

Tuberculoid: hypopigmented hairless lesion (TH1 reaction)

Lepromatous: diffuse granuloma, "saddle nose", neuropathy (TH2 reaction)

 

Dapsone and rifamipin for 6 months (lepromatous, plus clofazimine for 2-5 years)

 

Carried by armadillos, or spread by contact or inhalation

M. avium in immunocompromised only 

M. marinum with seawater contamination (granuloma)

Term
Nocardia asteriudes, Nocardia brasilliensis
Definition

G+ beaded filaments, wealky acid fast (mycolic acid), obligate aerobe, urease +

 

pneumonia, abscesses in kidney & brain

 

TMP-SMX, surgical drainage

CNS: TMP-SMX + cephalosporin or imipenem

 

Frequently found in soil

Infections are most common in immuncompromised patients

Term
M. chelonae etc
Definition
Term
MAC
Definition

Mycobacterium avium complex

 M. avium & intracellulare

 

 avium - possible Crohn's disease or pulmonary disease

intracellulare - pulmonary disease in immunocompetent hosts

 

acquired through contaminated oral intake

dissemination widespread in immunocompromised patients

 

macrolide (clarithromycin, azithromycin), plus rifamycin (rifampin, rifabutin) and ethambutol

Prophylaxis: clarithromycin or azithromycin 

 

Term
Haemophilus influenzae
Definition

G- coccobacilli, grown on chocoate agar

 

pneumonia, epiglottitis, otitis media, meningitis (encapsulated Type B strain), sepsis and septic arthritis in asplenic patients 

 

Vaccine available for Type B strain capsule with diptheria toxin, given at 2-18 months. β lactam, ceftriaxone, rifampin 

 

Factor 5 (nicotenamide added to chocolate agar)

aerosol

Term
Rhodococcus
Definition

G+ weakly acid fast bacilli with possible rudimentary branching; revert to coccoid forms after 14-18 hours growth in lab

 

oppurtunistic facultative intracellular organism that survives within macrophages

 

Localized infections: extended spectrum macrolide (azrithromycin, clarithromycin) or fluoroquinolone (levofloxacin)

Disseminated infections: two or more antibiotics such as vanc, imipenem, aminoglycosides, fluoroquinolones, rifampicin

 

not PCN or cephalosporins (cell wall synthesis is modified)

 

50% fatality in immunocompromise

20% fatality in immunocompetent

 

Term
suppurative vs. non-suppurative
Definition

suppurative - purulent

 

cutaneous localized pyogenic  infections: carbuncles/furncles, staphylococcal wound infection

 

systemic: pneumonia/empyema, osteomyelitis, septic arthritis, bacteremia, endocarditis

Term
Toxic Shock Syndrome
Definition

caused by Staphyococcus aureus (tampons or surgery) Streptococcus pyogenes (skin infections)

 

Presents as fever, hypotension and diffuse erythematous rash

 

potentially fatal

 

purpura fulminans: virulent form of TSS with larger purpuric skin lesion, fever, and disseminated intravascular coagulation 

Term
Scalded Skin Syndrome
Definition

caused by Staphylococcus aureus (SSSS)

 

skin wound or cutting umbilicus in neonates. exfoliative toxins ETA & ETB are produced

 

potentially fatal

Term
carbuncle/furnuncle
Definition

large, erythematous (or indurated) swollen area on diabetic patient

 

follicular involvement

Term
Scarlet Fever
Definition

Cause by S. pyogenes

 

pharyngitis + "sandpaper" rash (spares face), "strawberry tongue" within first 2 days, desquamation of palms and soles after rash subsides 

 

Extoxins A (TSLS), B (protease, related to necrosis) & C (TSLS)

Term
Rheumatic fever
Definition

 S. pyogenes pharyngitis left untreated in children my develop into rheumatic fever through an autoimmune cross-reaction between anti-strepococcal antibodies and antigens naturally present in the joints and heart tissue

 

Permanent endocardial damage (esp. mitral stenosis) which may present as murmur years later

 

J♥NES: Joints (polyarthritis), heart problems (valvular damage, myocarditis, pericarditis), nodules (f-arm, elbows, knees), erythema marginatum, sydenham's chorea (involuntary movements, esp. hands and face)

Term
Post-Strep Glomerulonephritis
Definition

 Immune response to S. pyogenes pharyngitis or impetigo can cause deposits of immune complexes on the glomerular basement membranes resulting in glomerular inflammation which develops 2-3 weeks after infection.

 

Hematuria (dark brown urine), hypertension, periorbital edema

 

Complete recovery likely. Treat with PCN.

Term
necrotizing fasciitis
Definition

S. pyogenes is introduced to the investing fascia by trauma or surgery. 

 

Extoxin B released → rapid necrosis along fascial planes w/o damage to muscles

Term
Stapylococcal Enterotoxins
Definition

Enterotoxin A - food poisoning

 

B - pseudomembranous enterocolitis

 

C & D - milk products

Term
Stapylococcal Exfoliative Toxins
Definition

ETA - heat stable, phage associated

 

ETB - heat liable, plasmid associated 

 

both are proteases

Term
Bullous impeigo
Definition
localized form of SSSS, highly contagious
Term
Rifampin
Definition

Inhibits RNA synthesis

 

crosses BBB (debated)

 

orange/red urine, tears, or sweat

speed up CYP450 (birth control)

 

mutation in rpoB gene encoding the β-subunit of DNAD-RNAP 

 

avoid giving with HIV protease inhibitors 

Term
Isoniazid
Definition

inhibits sythesis of mycolic acids, activated by KatG; works on actively growing bacteria best

 

penetrates BBB

 

Asian and Native American decent may need higher doses (metabolized more quickly)

 

supplement with vitamin B6 to prevent neurotoxic effects

monitor for hepatotoxicity; stop drug if hepatitis develops

 

inhibits CYP450; affects phenytoin,carbamazepine  and warfarin

 

mutation of katG gene

Term
Pyranzinamide
Definition

active only against mycobacteria; mechanism of action not completely understood, but thought to involve cell membrane metabolism and transport functions

 

causes hyperuricemia may provoke arthritis

 

avoid during pregnancy

Term
Ethambutal
Definition

inhibits mycobacterial arabinosyl transferase 

 

resistance emerges rapidly if used alone

 

can lead to red-green colorblindness at high doses

 

few adverse reactions with other drugs

Term
linezolid
Definition

oxazolidones

 

bacteriostatic "drug of last resort"

Term
quinupristin/dalfopristin
Definition

streptogamin

 

"drug of last resort" against MRSA

Term
[image]
Definition

Pyoderma (Impetigo)

 

Streptococcus pyogenes

Term
[image]
Definition

Erysipeals

 

signs of systemic infection: fever, chills, etc

 

Streptococcus pyogenes

Term
[image]
Definition

Necrotizing Fascitis with bulllae (fatal)

 

Streptococcus pyogenes

Term
[image]
Definition

M. scrofulaceum

 

Localized lymph node infection

 

surgical removal

Term
[image]
Definition

M. marinum

 

cutaneous infections associated with exposure to water (salt or fresh)

 

rifampin, ethambutol, claritrhromycin

 

"aquarium owners disease" 

Term
[image]
Definition

M. kansasii

 

photochromagen

 

pulmonary disease

 

Treat like Tb 

Term
[image]
Definition

M. fortuitum & abscessus

 

Deep subcutaneous infection that may disseminate

 

trauma or iatrogenic 

Term

Stapylococcal Cytoxins

 

α

 

β

 

δ

 

γ

Definition

α - pore forming

 

β - heat-labile

 

δ - cytolytic surfactant

 

γ - rapid cell death of neutorphils

Term

Virulence Factors:

 

Staphylococcus aureus

 

influenza

 

group A Strep

 

IgA proteases

Definition

Sa: Protein A

 

hemagglutin (facilitates cellular entry)

 

M protein and streptokinase

 

Streptococcus pneumonia, Haemophilus influenzae type B, & Neisseria spp.

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