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AP 26-28
Biodiversity, protists, prokaryotes
63
Biology
11th Grade
03/31/2008

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Term
Endosymbiosis
Definition
when separate organisms begin to work together in symbiosis, and develop into one organism because they cannot live without each other
Term
3 types of Protists
Definition
Protozoa, Absorptive, Algae
Term
Protozoa
Definition
ingestive heterotrophs - "animal-like"
Term
Absorptive Protists
Definition
absorb nutrients from outside, do not make their own energy

fungi - mushrooms
Term
giardia
Definition
animals dessicate in water, you get some really bad effects from drinking it
Term
Algae
Definition
photosynthetic, plant-like
form mycorrhizae with fungi
Term
diplomonads and parabasalids
Definition
anaerobic
diplomonads - two nuclei - like giardia



parabasalids include trichomonads such as trichomonads vaginalis which lives in vaginas. YAY
Term
euglenozoans
Definition
have unique flagella - crystalline rods in flagella <-- characteristic of euglenozoans

includes kinetoplastids
Term
kinetoplastids
Definition
like mitochondria, but not. doesn't perform mito. functions.
kinet. has extra nuclear DNA
lives in water and land
a type of euglenazoan

heterotrophic
Term
Trypanosoma
Definition
a parasitic kinetoplastid which causes african sleeping sickness (you die) - contract it from a tsetse fly

get into your blood cells and do nasty stuff

achy, headaches, rash, confusion, slurring, personality change, seizures etc - you die 3 weeks to a month after bite from fly
Term
euglenids
Definition
the other type of euglenazoan

have two flagella at end of cell - their funky thing is their storage of a form of glucose called paramylon

autotrophic (they're green, have chloroplasts)
Term
alveolates
Definition
lung-like sacs
Term
dinoflagellates
Definition
diverse aquatic photoautotrophs and heterotrophs
abundant components of marine and freshwater phytoplankton

rapid growth causes red tides - toxic for humans
some are bioluminescant
Term
apicomplexans
Definition
another type of alveolate

parasites of animals and humans - cause diseases

one end apex is for penetrating host cells and tissues BITING end

have apicoplast - nonphotosynthetic end
have sexual and asexual stages that often need two or more different host species for completion
have intricate life cycles i.e. malaria
sexual life cycle happens in mosquito - fertilization and meiosis
reproduce in liver, morph into different form that infects red blood cells
i.e. malaria
Term
ciliates
Definition
paramecium
named for use of cilia to move and feed
have large and small macro and micro nuclei (two nuclei)
micro function during conjugation
macro does everyday stuff
conjugation is their sex to binary fission
KNOW structure and function

PARAMECIUM - live in hypotonic - water keeps going in, they use contractile vacuole to pump water out (and poo at the same time)
know basics of anatomy

CONJUGATION
swaps genetic material
need two paramecium of compatible mating type
must be opposite mating types
they get really close side by side and fuse (membranes)
diploid micronuclei YAY MICRO
micros undergo meiosis - 4 haploid micronuclei
3 of 4 dissolve, 1 that is left undergoes mitosis (twin copy)
then they trade their new micronuclei
each have one of the others haploid micronuclei
then micronuclei fuse to become diploid again
diploid micronuc undergoes 3 rounds of micronucs to get 8 hap. mic.
4 become macronuclei and macronucleus dissolves
4 stay micronuclei
cell goes through 2 rounds of cytokenesis to make four new cells
NOW THERE are EIGHT new cells total (the two in the beginning have 1/4 of them in each new cell
Term
oomycetes
Definition
water molds, white rusts, downy mildews
were once considered fungi fased on morphological studies
they are decomposers
cause ICK in fish
water molds have a and sexual life cycles
hyphi - fungus like (absorbtive) causes ICK - like a root / anchoring system ; network of branches to increase surface area to absorb more

also cause potato blight - caused irish potato famine
Term
diatoms
Definition
the hat-box wheel
contain cilica (look like blown glass)
a major component of phytoplankton
fossils of diatom walls make diatomaceous earth (filtering in pools)
Term
golden algae
Definition
named for color; are biflagellates
can be unicellular or colonial
Term
brown algae
Definition
most common
multi cellular, mostly marine
Term
seaweeds
Definition
blade, stipe, holdfast
have most diverse structures of algaie

giant kelp is the biggest protist on earth
seaweed in sushi!!!
Term
life cycles of multicellular algae
Definition
alternates between dip and haploid form in most complex life cycle
haploid = gametophyte; diploid = called sporophyte
(KNOW THIS SHE WROTE IT ON BOARD)
heteromorphic (different forms) vs. isomorphic (look the same) forms

life cycle of brown alga laminaria
sporophyte --> spores by meiosis (zoospores) --> grow up into gametophyte --> male and female gametophytes reproduce by mitosis (cuz already haploid) and fuse their haploid copies --> grows up into sporophyte
all plants all fungus all algae --> this concept holds for all alternating sexual lifestyles
Term
stramenophiles are...
Definition
brown algae, diatoms, seaweed, oomycetes
Term
cercozoans and radiolarins
Definition
threadlike pseudopodia
cercozoa is newly recognized clade --> includes amoebas (formerly defined as protists)

cercozoans have thread-like pseudopods
Term
pseudopods
Definition
fake feet - extend out through shell
foram tests
Term
radiolarians
Definition
marine protists
tests are fused into one delicate piece, generally made of silica - they phagocytose microorganisms with their pseudopodia
Term
amoebezoans
Definition
lobe-shaped pseudopods
Term
YOU ONLY REALLY NEED TO KNOW....
Definition
dinoflagellates, diatoms, paramecium, algae, amoebas, euglena
Term
gymnamoebas
Definition
phagocytosis - heterotrophic
pseudopods
Term
entamoebas
Definition
parasites of vertebrates and some invertebrates

causes dysentery (entamoeba histolytica)
100,000 deaths from dystentary
3rd leading cause of death due to parasites
Term
slime molds / mycetozoans
Definition
produce fruiting bodies that aid in spore dispersal- evolutionary convergence instead

alternation of generations
Term
plasmodium
Definition
undivided by membranes and contains many diploid nuclei
extends pseudopodia into deomposing material, EATS (phagocytosis)
Term
red and green algae
Definition
closest relatives of land plants

heterotrophic protist got cyanobacterial endosymbiont
descendants evolved into red and green algae
RED
have pigment that masks green chlorophyll - multi-cellular; seaweed
GREEN
for chloroplasts - divided into chlorophytes and charophyceans
closely related to land plants
chlorophytes live in fresh water, some salt water, damp soil, snow, and symbionts in lichens
include unicellular, colonial, and multicellular forms
have complex life cycles (a and sexual)
Term
genetic annealing
Definition
the production of a new genome through the transfer of part of the genome of one organism to another
Term
episodic geologic and biological history was a series of....
Definition
bang --> bang --> bang
mass extinctions
Term
four main stages in the process of simple cells being produced by chemical and physical processes
Definition
ABIOTIC SYNTHESIS of small organic molecules (amino acids and nucleotides)
JOINING of these monomers into polymers (proteins and nucleic acids)
PACKAGING of these molecules into PROTOBIONTS
the origin of self replicating molecules eventually made this possible

PROTOBIONTS- droplets that maintain a different internal chemistry than their surroundings
Term
Protobionts
Definition
droplets that maintain a different internal chemistry than their surroundings thanks to being surrounded by a membrane or membrane-like structure

aggregates
Term
a reducing environment
Definition
gains electrons

hypothesis of Oparin and Haldane of earth's early atmosphere
Term
life on earth could have started three ways
Definition
slow evolution of protobionts

underwater deep sea vents and underwater volcanoes

from meteors (Carbon compounds have been found) --> possibility of life on other planets
Term
Liposomes
Definition
membrane-bounded droplets that can form when lipids or organic molecules are added to water

absorb glucose-phosphate and puts out maltose and phosphate
Term
early protobionts were made up of...
Definition
...self-replicating, catalytic RNA
Term
The three eons of the geologic record
Definition
the Archaean, the Proterozoic, and the Phanerozoic
Term
fossils show us...
Definition
...mass extinctions and fluctuations in species thanks to sedimentary strata
Term
the two major mass extinctions were....
Definition
...the Permian and the Cretaceous
Term
electron transport systems were...
Definition
...essential to early life, and possibly precede life itself
Term
oxygen was not part of the earliest kind of photosynthesis, so when it was added to the atmosphere...
Definition
...it posed a challenge at first, but a new thing to exploit, but could be the reason behind eukaryotic evolution
Term
endosymbiosis
Definition
when a mutually symbiotic relationship became interdependency --> this made them one organism
i.e. mitochondria and plastids
Term
first multi-cellular organisms were colonies. elaborate!
Definition
some cells became specialized for certain activities
Term
the cambrian explosion
Definition
most major phyla of animals occur 20 mil years after start of cambrian period

everything happened in WATER due to fluid reproduction
Term
continental drift
Definition
pangaea separated and now continents are puzzle peices
Term
how much genetic diversity do prokaryotes have?
Definition
a LOT because they reproduce all the time
Term
the shapes of prokaryotes
Definition
THREE
COCCI - spherical i.e. strep
BACILLI- rod-shaped
SPIRAL
Term
most important structural part of a prokaryote is...
Definition
...their CELL WALL
maintains cell shape, protects insides, and prevents cell from bursting in hypotonic environment
Term
when prokaryotes plasmolyze, they are in a...
Definition
...hypertonic environment
i.e. salt kills all the bacteria around it
Term
two types of cell wall composition
Definition
GRAM-NEGATIVE
using a gram stain, turn up dark violet b/c their PEPTIDOGLYCAN LAYER soaks up dye and traps it in the cytolplasm
GRAM-POSITIVE
have an outer membrane with a lipopolysaccharide layer which does not soak up the violet dye, and when the plate is rinsed with alcohol, it washes off and the red dye that is added next is seen
Term
Fimbriae
Definition
many short pili (like the sex pilus in conjugation) that allow prokaryotes to stick to substrate or eachother
Term
TAXIS
Definition
in a heterogenous environment, many bacteria exhibit TAXIS - reacting to a stimulant, either going towards it or fleeing
Term
the prokaryotic genome is formed in the shape of a...
Definition
...RING that is not surrounded by a membrane, but is isolated in a nucleoid region
Term
an endospore
Definition
is a hardy part of many prokaryotes that remain viable in harsh conditions
Term
four models of nutrition
Definition
CHEMO OR PHOTO
AUTO OR HETERO
autotrophs get their carbon from CO2
Term
prokaryotic metabolism varies with oxygen - there is anaerobic and aerobic. what are the three types of aerobes?
Definition
obligate aerobes - require oxygen

facultative anaerobes - can do w/ or w/o oxygen

obligate aerobes - use nitrate ions or sulfate ions for Electron Transport Chain (are poisoned by oxygen)
Term
prokaryotes metabolize nitrogen by...
Definition
...nitrogen fixation! atmospheric nitrogen is processed into ammonia
Term
metabolic cooperation
Definition
cooperation between prokaryotes --> allows them to use resources they could not use on their own
in some, this creates surface-coating colonies called biofilm
ex: cyanobacterium ANABAENA
photosynthesizing portion and nitrogen-fixing cells exchange their products
Term
prokaryotes used to be grouped by phenotype, but now they are organized by molecular systematics and their phylogenetic relationships.
there are two large groups...
Definition
...they are the proteobacteria and the gram-positive bacteria.

PROTEOBACTERIA

Chlamydias, spirochetes, gram-positive bacteria, and cyanobacteria
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