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303 exam2- lec.6
n/a
32
Biochemistry
Undergraduate 3
10/23/2013

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Term
Folding starts-- but it is not neccessarily the -- structure
folding is complete-
Definition
immediately on the ribosome
final/correct structure
after peptide leaves ribosome
Term
Proteins are synthesized as a --dimensional sequence
without regard to --dimensional final structure
Definition
one
three
Term
If a Protein folds correctly by itself it makes a:
Definition
functional protein
Term
If a protein doesn't fold correctly by itself it -
Definition
can fold correctly with a chaperone protein which leads to a functional protein.
Term
If a protein (with or without a chaperone) folds incorrectly either- or -
Definition
leads to aggregation or degraded proteasomes.
Term
Heat shock proteins are expressed in response to -- because -- therefore chaperones--
Definition
elevated temperature or cell stress.
b/c protein folding is affected by heat. Therefore chaperones can repair potential damage of misfolding
Term
How many chaperones in all cells?
Definition
lots and lots
Term
chaperones-
Definition
help with protein folding/ or just help bloack aggregation.
Term
Unfolded/misfolded proteins may form
Definition
large, insoluble conglomerates in cells
Term
protein aggregation sometimes happens when --
Definition
when overexpressing eukaryotic proteins in bacteria
Term
protein aggregation diseases:
Definition
• Huntington’s disease
• Alzheimer’s disease•
Prion diseases-
• Creutzfeldt-Jacob disease
• Chronic wasting disease
• Mad cow disease
Term
Misfolded proteins can alter the conformation of -- by --
Definition
other proteins:
Formation of disease- causing amyloid fibrils
Term
most proteins are -- after tranlation in the --. Proteolysis=
Definition
covalently modified, golgi apparatus.
cleaving of protein leading to activation (insulin) or degredation
Term
where is Processing pathway for insulin
Definition
Beta cells of the islets of Langerhans in the pancreas
Term
Endoplasmic reticulum =
Definition
"network inside the part of a cell that is outside the nucleus"
Term
insulin is a
Definition
polypeptide
Term
ER with ribosomes attached
Definition
= rough ER
Term
ER with no ribosomes attached =
Definition
smooth ER
Term
processing pathway for insulin-
Definition
1. mRNA codes for preproinsulin on cystosolic ribosomes on the rough ER
2. peptide transported into lumen of ER.
3. signal seq. at the N-terminal end of preproinsulin is removed (proteolysis) to form proinsulin
4. proinsulin is stored in ER lumen until signal releases it.
5. signal arrives and proinsulin-> insulin as it passes thru golgi to blood.
Term
preproinsulin makes
Definition
2 biologically active
insulin +C peptide
Term
Insulin structure has -- that have to be between those specific -- to be --. If between others it will be --
Definition
three disulfide bonds
cystienes if to be active
inactive
Term
Preproinsulin squirms from --to -- the signal seq is removed by -- the peptide bond between --and the -- is cleaved.
Definition
ribosomes to lumen of ER
proteolitic action/ enzymes
C terminal of the signal seq
N terminal of the B seq
Term
The proinsulin =
folds
major reason for-
Definition
the molecule that enters the lumen of the ER folds such that disulfide bonds are made between proper cystadine groups which is major reason it is a precursor to insulin.
Term
How does the proinsulin fold?
Definition
The 3 pairs of cystadines become adjacent to each other to make proper disulfide bonds
Term
-- direct aa translocation into the ER.
Definition
Amino-terminal signal sequences
Term
AA terminal signal seq description
Definition
Lys or Arg comes before a hydrophobic core. Right before a cleavage site is a Gly or Ala (polar short side chain)
Term
ribosome starts making a polypetide at the --' end at the start seq=
the first 20 aa are- recognized by--
Definition
5' GUA
signal seq
sgnal requenition particle (SRP) which opens a channel.
Term
how are EUK proteins directed to ER lumen?
Definition
mRNA and ribsome at start codon make the first part of signal seq wich the SRP binds to. SRP then is recognized by receptor on ER which forms a channel and lets the chain enter the ER.
Term
Proteins are moved from the ER to the -- in transport vesicles. Sorting occurs primarily in the --
Definition
cis side of the Golgi complex
trans side of the Golgi complex.
Term
chaperone mechanism-
Definition
1. dnaJ binds to unfolded protein and then the DNA K.
2. DNA J stimulates the atp hydrolysis of dnaK. dnak-atp complex binds tight to protein
3. GrPE stimulates the release of ADP
4. ATP binds to dnaK again and the protein dissociates
5. protein is either folded correctly or it repeats the cycle or it goes to GroEL cycle
Term
protein enters - golgi and exits-
Definition
enters on cis side
exits on trans
Term
Ricin removes
Definition
specific adenine from the 28S rRNA and disrupts protein synthesis.
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